Pykaryote is a set of tools for modeling and studying the evolution of biological complexity.
Documentation is hosted at Read The Docs:
https://pykaryote.readthedocs.org/en/latest/
Installation
Pykaryote requires a number of dependencies, including Python and Open MPI. For installation instructions, see the documentation:
https://pykaryote.readthedocs.org/en/latest/tut/installing.html
Once the dependencies are installed, Pykaryote can be installed with:
pip install pykaryote
Usage
The main front end to Pykaryote is petri. To run a simulation with the default settings, run:
mpirun -np 2 petri run
This will save data and graphs to ~/pykaryote/comparison
For more information, see the Pykaryote documentation.
2 maintainers
Metadata
2 maintainers
Release files for pykaryote 1.1.1
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | |
|---|---|---|---|---|
| pykaryote-1.1.1.tar.gz | 1.5 MB | Without provenance | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| pykaryote-1.1.1-py2.7-linux-i686.egg | Legacy Egg format | - | - | Details |
Total release size: 3.0 MB
Release files / pykaryote-1.1.1.tar.gz
| Download URL | pykaryote-1.1.1.tar.gz |
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| Size | 1.5 MB |
| Tags | Source |
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Release files / pykaryote-1.1.1-py2.7-linux-i686.egg
| Download URL | pykaryote-1.1.1-py2.7-linux-i686.egg |
|---|---|
| Size | 1.5 MB |
| Tags | Egg |
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Security for pykaryote 1.1.1
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