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Pykaryote is a set of tools for modeling and studying the evolution of biological complexity.

Documentation is hosted at Read The Docs:

https://pykaryote.readthedocs.org/en/latest/

Installation

Pykaryote requires a number of dependencies, including Python and Open MPI. For installation instructions, see the documentation:

https://pykaryote.readthedocs.org/en/latest/tut/installing.html

Once the dependencies are installed, Pykaryote can be installed with:

pip install pykaryote

Usage

The main front end to Pykaryote is petri. To run a simulation with the default settings, run:

mpirun -np 2 petri run

This will save data and graphs to ~/pykaryote/comparison

For more information, see the Pykaryote documentation.

Release files for pykaryote 1.1.1

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for pykaryote 1.1.1
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pykaryote-1.1.1.tar.gz 1.5 MB Details

Built distribution (wheel)

Table of built distributions (wheels) for pykaryote 1.1.1
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pykaryote-1.1.1-py2.7-linux-i686.egg Legacy Egg format - - Details

Total release size: 3.0 MB

Release files / pykaryote-1.1.1.tar.gz

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Release files / pykaryote-1.1.1-py2.7-linux-i686.egg

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1.1.1 This release

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1.1.0

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