mmLib-2.0.x: Python Macromolecular Library (mmLib)

URL of original project: http://pymmlib.sourceforge.net/

Ported to Python3

REVISIONS:

2024-11-09: 2.0.6: Runs using Python3
2024-11-06: 2.0.0: Runs using Python3
2011-03-27: 1.2.0: Skittles/validation support
2008-02-26: 1.1.0: PHENIX support; Christoph Champ
2007-04-28: 1.0.0

DESCRIPTION:

The Python Macromolecular Library (mmLib) is a collection of Python modules the examination and manipulation of macromolecular structures, and the files which describe them.

REQUIREMENTS:

Python >= 3.8
numpy >= 1.26

GUI and OpenGL not tested under Python3

Additional requirements for the mmCIF Editor and tlsview.py Viewer:

PyOpenGL >= 2.0.0.44 (http://pyopengl.sourceforge.net/)
gtk >= 2.0/2.2 (http://www.gtk.org/)
PyGtk >= 1.99.16 (http://www.pygtk.org/)
GtkGLExt >= 1.0 (http://gtkglext.sourceforge.net)
PyGtkGLExt >= 1.0 (http://gtkglext.sourceforge.net)

HARDWARE: If you want to use the GLViewer.py module, or use the mmLib Molecular Viewer, you will need OpenGL hardware acceleration provided by your video card and driver. We have tested this on a NVIDIA 5200FX using RedHat 9.0 and the latest NVIDIA-6106 driver.

INSTALLATION:

pip install pymmlib3 More here but this document is mostly outdated: INSTALL.txt

PROBLEMS/BUG REPORTS/CONTACT:

You can contact us through our SourceForge site, or email us directly at:

Metadata

Release files for pymmlib3 2.1.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Built distributions (wheels)

Table of built distributions (wheels) for pymmlib3 2.1.0
File	Interpreter	ABI	Platform	Reset
pymmlib3-2.1.0-cp313-cp313-manylinux_2_5_x86_64.manylinux1_x86_64.whl 212.0 kB Dec 2, 2024	CPython 3.13	CPython 3.13	Linux glibc 2.5+ x86-64	Details
pymmlib3-2.1.0-cp312-cp312-manylinux_2_5_x86_64.manylinux1_x86_64.whl 213.3 kB Dec 2, 2024	CPython 3.12	CPython 3.12	Linux glibc 2.5+ x86-64	Details
pymmlib3-2.1.0-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.whl 213.1 kB Dec 2, 2024	CPython 3.11	CPython 3.11	Linux glibc 2.5+ x86-64	Details
pymmlib3-2.1.0-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.whl 212.3 kB Dec 2, 2024	CPython 3.10	CPython 3.10	Linux glibc 2.5+ x86-64	Details
pymmlib3-2.1.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl 212.1 kB Dec 2, 2024	CPython 3.9	CPython 3.9	Linux glibc 2.5+ x86-64	Details
pymmlib3-2.1.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl 212.5 kB Dec 2, 2024	CPython 3.8	CPython 3.8	Linux glibc 2.5+ x86-64	Details

Total release size: 1.3 MB

Release files / pymmlib3-2.1.0-cp313-cp313-manylinux_2_5_x86_64.manylinux1_x86_64.whl

Download URL	pymmlib3-2.1.0-cp313-cp313-manylinux_2_5_x86_64.manylinux1_x86_64.whl
Size	212.0 kB
Tags	CPython 3.13 Linux glibc 2.5+ x86-64
SHA-256 checksum How to use checksums	`dd8e032bff2dd3b9cc6b19f979bee9950528d81534fc2e19310dd8e0e8bd9007`
BLAKE2b-256 checksum How to use checksums	`1e561a31cced0e391e24532d6d790ea9552fd14f4dd41ad2374440366a42fcb3`
Upload date	Dec 2, 2024
Uploaded using Trusted Publishing? What is trusted publishing?	Yes
Uploaded via	`twine/5.1.1 CPython/3.12.7`

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Publishing platform: GitHub Actions
Publishing repository: github.com/prubach/pymmlib3
Publishing commit: github.com/prubach/pymmlib3/tree/5725b6353d64e2cfd65f519cb8114dd671cda6c0

Workflow

Publishing configuration: github.com/prubach/pymmlib3/blob/5725b6353d64e2cfd65f519cb8114dd671cda6c0/.github/workflows/publish-to-pypi.yml
Publishing logs: github.com/prubach/pymmlib3/actions/runs/12127622660/attempts/1

Artifact

Subject: pymmlib3-2.1.0-cp313-cp313-manylinux1_x86_64.manylinux_2_5_x86_64.whl
SHA-256 checksum: dd8e032bff2dd3b9cc6b19f979bee9950528d81534fc2e19310dd8e0e8bd9007 Verifying attestations

Release files / pymmlib3-2.1.0-cp312-cp312-manylinux_2_5_x86_64.manylinux1_x86_64.whl

Download URL	pymmlib3-2.1.0-cp312-cp312-manylinux_2_5_x86_64.manylinux1_x86_64.whl
Size	213.3 kB
Tags	CPython 3.12 Linux glibc 2.5+ x86-64
SHA-256 checksum How to use checksums	`e64482b89d67a773512afb355a173aed2603fa2b9e16341290f4ea420444dbb7`
BLAKE2b-256 checksum How to use checksums	`3af308008149926884dbb32dd8fc17e34dcaab00bb2cb90df6e1cd8397dcdf50`
Upload date	Dec 2, 2024
Uploaded using Trusted Publishing? What is trusted publishing?	Yes
Uploaded via	`twine/5.1.1 CPython/3.12.7`

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Identity

Publishing platform: GitHub Actions
Publishing repository: github.com/prubach/pymmlib3
Publishing commit: github.com/prubach/pymmlib3/tree/5725b6353d64e2cfd65f519cb8114dd671cda6c0

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Publishing configuration: github.com/prubach/pymmlib3/blob/5725b6353d64e2cfd65f519cb8114dd671cda6c0/.github/workflows/publish-to-pypi.yml
Publishing logs: github.com/prubach/pymmlib3/actions/runs/12127622660/attempts/1

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Subject: pymmlib3-2.1.0-cp312-cp312-manylinux1_x86_64.manylinux_2_5_x86_64.whl
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Release files / pymmlib3-2.1.0-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.whl

Download URL	pymmlib3-2.1.0-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.whl
Size	213.1 kB
Tags	CPython 3.11 Linux glibc 2.5+ x86-64
SHA-256 checksum How to use checksums	`2c098db1eb800ef166c120174ae8015ba2b626b70855919259047b376492aed5`
BLAKE2b-256 checksum How to use checksums	`62d4ea5be3238330d86bb9940bbd784196edd01431b3c81aa4f2eb74e22667f0`
Upload date	Dec 2, 2024
Uploaded using Trusted Publishing? What is trusted publishing?	Yes
Uploaded via	`twine/5.1.1 CPython/3.12.7`

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Identity

Publishing platform: GitHub Actions
Publishing repository: github.com/prubach/pymmlib3
Publishing commit: github.com/prubach/pymmlib3/tree/5725b6353d64e2cfd65f519cb8114dd671cda6c0

Workflow

Publishing configuration: github.com/prubach/pymmlib3/blob/5725b6353d64e2cfd65f519cb8114dd671cda6c0/.github/workflows/publish-to-pypi.yml
Publishing logs: github.com/prubach/pymmlib3/actions/runs/12127622660/attempts/1

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Subject: pymmlib3-2.1.0-cp311-cp311-manylinux1_x86_64.manylinux_2_5_x86_64.whl
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Release files / pymmlib3-2.1.0-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.whl

Download URL	pymmlib3-2.1.0-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.whl
Size	212.3 kB
Tags	CPython 3.10 Linux glibc 2.5+ x86-64
SHA-256 checksum How to use checksums	`6484790fe293f3a460d81fc0bbb3cd78fb0e4a57a92f1c527e55e8f7cd873482`
BLAKE2b-256 checksum How to use checksums	`62fbc581939993e494d9261464fb74105827aa3fd2abd8bfb36c30bc270bf38d`
Upload date	Dec 2, 2024
Uploaded using Trusted Publishing? What is trusted publishing?	Yes
Uploaded via	`twine/5.1.1 CPython/3.12.7`

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Publishing platform: GitHub Actions
Publishing repository: github.com/prubach/pymmlib3
Publishing commit: github.com/prubach/pymmlib3/tree/5725b6353d64e2cfd65f519cb8114dd671cda6c0

Workflow

Publishing configuration: github.com/prubach/pymmlib3/blob/5725b6353d64e2cfd65f519cb8114dd671cda6c0/.github/workflows/publish-to-pypi.yml
Publishing logs: github.com/prubach/pymmlib3/actions/runs/12127622660/attempts/1

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Subject: pymmlib3-2.1.0-cp310-cp310-manylinux1_x86_64.manylinux_2_5_x86_64.whl
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Release files / pymmlib3-2.1.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl

Download URL	pymmlib3-2.1.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl
Size	212.1 kB
Tags	CPython 3.9 Linux glibc 2.5+ x86-64
SHA-256 checksum How to use checksums	`61c3a8ef09d82c341a4442c792792b1256129a0cc09510be7890c70f4e27ce59`
BLAKE2b-256 checksum How to use checksums	`f488902413c6bb1d3c7d25214fcd39e9c162117ddc78e985f4ed792596249d4e`
Upload date	Dec 2, 2024
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Uploaded via	`twine/5.1.1 CPython/3.12.7`

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Publishing platform: GitHub Actions
Publishing repository: github.com/prubach/pymmlib3
Publishing commit: github.com/prubach/pymmlib3/tree/5725b6353d64e2cfd65f519cb8114dd671cda6c0

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Release files / pymmlib3-2.1.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl

Download URL	pymmlib3-2.1.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl
Size	212.5 kB
Tags	CPython 3.8 Linux glibc 2.5+ x86-64
SHA-256 checksum How to use checksums	`4bc47a490428822e047314c3f93a6553b2899af3f1af2e8fa9e2969914ca09f7`
BLAKE2b-256 checksum How to use checksums	`7619df897f0a63a4f597db61ded207005daed87259b98ae8b7215d0c87031901`
Upload date	Dec 2, 2024
Uploaded using Trusted Publishing? What is trusted publishing?	Yes
Uploaded via	`twine/5.1.1 CPython/3.12.7`

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Publishing platform: GitHub Actions
Publishing repository: github.com/prubach/pymmlib3
Publishing commit: github.com/prubach/pymmlib3/tree/5725b6353d64e2cfd65f519cb8114dd671cda6c0

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Publishing configuration: github.com/prubach/pymmlib3/blob/5725b6353d64e2cfd65f519cb8114dd671cda6c0/.github/workflows/publish-to-pypi.yml
Publishing logs: github.com/prubach/pymmlib3/actions/runs/12127622660/attempts/1

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