Organoid Processing Unit (OPU) framework for Organoid Computing
Project description
pyopu: Organoid Processing Unit Framework
pyopu is a Python framework for simulating and executing combinatorial optimization tasks on biological wetware (Brain Organoids) using the Holographic Tensorial Paradigm.
Features
- Agnostic Math Engine: Compile NP-Hard problems into Rank-2 and Rank-3 Tensors.
- Interchangeable Backends: Run problems on virtual MEAs (Microelectrode Arrays) or advanced Dual-Opsin Optogenetic interfaces.
- Observer Telemetry: Extract spikes, opsin kinetics, and energy dynamics cleanly without cluttering the engine.
Quickstart
Check the examples/ directory for full implementations of the Max-Cut and 3-SAT problems.
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