pyproject-fmt 2.22.0

Format your pyproject.toml file

Apply a consistent format to your pyproject.toml file with comment support. See changelog here.

Recent Changes

• ✨ feat(build): ship self-contained pyproject-fmt and tox-toml-fmt wheels by @gaborbernat in #363

• 🐛 fix(common): restore _build_cli alias for backward compatibility by @gaborbernat in #361

• ✨ feat(pyproject-fmt): add [tool.ty] handler by [@gaborbernat](https://github.com/gaborbernat) in #354

• ✨ feat(pyproject-fmt): add [tool.deptry] handler by [@gaborbernat](https://github.com/gaborbernat) in #353

• ✨ feat(pyproject-fmt): add [tool.autopep8] handler by [@gaborbernat](https://github.com/gaborbernat) in #352

• ✨ feat(pyproject-fmt): add [tool.vulture] handler by [@gaborbernat](https://github.com/gaborbernat) in #351

• ✨ feat(pyproject-fmt): add [tool.docformatter] handler by [@gaborbernat](https://github.com/gaborbernat) in #350

• ✨ feat(pyproject-fmt): add [tool.interrogate] handler by [@gaborbernat](https://github.com/gaborbernat) in #349

• ✨ feat(pyproject-fmt): add [tool.bumpversion] handler by [@gaborbernat](https://github.com/gaborbernat) in #348

• ✨ feat(pyproject-fmt): add [tool.scikit-build] handler by [@gaborbernat](https://github.com/gaborbernat) in #347

• ✨ feat(pyproject-fmt): add [tool.semantic_release] handler by [@gaborbernat](https://github.com/gaborbernat) in #346

• ✨ feat(pyproject-fmt): add [tool.pyrefly] handler by [@gaborbernat](https://github.com/gaborbernat) in #345

• ✨ feat(pyproject-fmt): add [tool.check-manifest] handler by [@gaborbernat](https://github.com/gaborbernat) in #344

• ✨ feat(pyproject-fmt): add [tool.yapf] handler by [@gaborbernat](https://github.com/gaborbernat) in #343

• ✨ feat(pyproject-fmt): add [tool.djlint] handler by [@gaborbernat](https://github.com/gaborbernat) in #342

• ✨ feat(pyproject-fmt): add [tool.pylint.*] handler by [@gaborbernat](https://github.com/gaborbernat) in #341

• ✨ feat(pyproject-fmt): add [tool.towncrier] handler by [@gaborbernat](https://github.com/gaborbernat) in #340

• ✨ feat(pyproject-fmt): add [tool.codespell] handler by [@gaborbernat](https://github.com/gaborbernat) in #338

• ✨ feat(pyproject-fmt): add [tool.maturin] handler by [@gaborbernat](https://github.com/gaborbernat) in #337

• ✨ feat(pyproject-fmt): add [tool.bandit] handler by [@gaborbernat](https://github.com/gaborbernat) in #336

• ✨ feat(pyproject-fmt): add [tool.tox] handler reusing tox-toml-fmt rules by @gaborbernat in #335

• ✨ feat(pyproject-fmt): add [tool.cibuildwheel] handler by [@gaborbernat](https://github.com/gaborbernat) in #334

• ✨ feat(pyproject-fmt): add [tool.pdm.*] handler by [@gaborbernat](https://github.com/gaborbernat) in #333

• ✨ feat(pyproject-fmt): add [tool.pyright] + [tool.basedpyright] handler by @gaborbernat in #332

• ✨ feat(pyproject-fmt): add [tool.isort] handler by [@gaborbernat](https://github.com/gaborbernat) in #331

• ✨ feat(pyproject-fmt): add [tool.hatch.*] handler by [@gaborbernat](https://github.com/gaborbernat) in #329

• ✨ feat(pyproject-fmt): add [tool.black] handler by [@gaborbernat](https://github.com/gaborbernat) in #328

• ✨ feat(pyproject-fmt): add [tool.pytest.ini_options] handler by [@gaborbernat](https://github.com/gaborbernat) in #327

• ✨ feat(pyproject-fmt): add [tool.setuptools] + [tool.setuptools_scm] handlers by @gaborbernat in #326

• ✨ feat(pyproject-fmt): add [tool.mypy] handler by [@gaborbernat](https://github.com/gaborbernat) in #325

• ✨ feat(pyproject-fmt): add [tool.poetry] handler by [@gaborbernat](https://github.com/gaborbernat) in #324

• ✨ feat(pyproject-fmt): add [tool.commitizen] handler by [@gaborbernat](https://github.com/gaborbernat) in #339

• Update Python dependencies by @gaborbernat in #358

• 🐛 fix(common): preserve triple-literal strings when re-emitting by @gaborbernat in #356

• ♻️ refactor(common): deduplicate table formatting CLI args by @gaborbernat in #320

• ✨ feat(common): add configurable table spacing options by @gaborbernat in #319

• Update Python dependencies by @gaborbernat in #310 <a id=”2.21.2”></a>

Philosophy

This tool aims to be an opinionated formatter, with similar objectives to black. This means it deliberately does not support a wide variety of configuration settings. In return, you get consistency, predictability, and smaller diffs.

Use

Via CLI

pyproject-fmt is a CLI tool that needs a Python interpreter (version 3.10 or higher) to run. We recommend either pipx or uv to install pyproject-fmt into an isolated environment. This has the added benefit that later you will be able to upgrade pyproject-fmt without affecting other parts of the system. We provide a method for pip too here, but we discourage that path if you can:

# install uv per https://docs.astral.sh/uv/#getting-started
uv tool install pyproject-fmt
pyproject-fmt --help

Via pre-commit hook

See pre-commit/pre-commit for instructions, sample .pre-commit-config.yaml:

- repo: https://github.com/tox-dev/pyproject-fmt
  # Use the sha / tag you want to point at
  # or use `pre-commit autoupdate` to get the latest version
  rev: ""
  hooks:
    - id: pyproject-fmt

Via Python

You can use pyproject-fmt as a Python module to format TOML content programmatically.

from pyproject_fmt import run

# Format a pyproject.toml file and return the exit code
exit_code = run(["path/to/pyproject.toml"])

The run function accepts command-line arguments as a list and returns an exit code (0 for success, non-zero for failure).

The tool.pyproject-fmt table is used when present in the pyproject.toml file:

[tool.pyproject-fmt]

# After how many columns split arrays/dicts into multiple lines and wrap long strings;
# use a trailing comma in arrays to force multiline format instead of lowering this value
column_width = 120

# Number of spaces for indentation
indent = 2

# Keep full version numbers (e.g., 1.0.0 instead of 1.0) in dependency specifiers
keep_full_version = false

# Automatically generate Python version classifiers based on requires-python
# Set to false to disable automatic classifier generation
generate_python_version_classifiers = true

# Maximum Python version for generating version classifiers
max_supported_python = "3.14"

# Table format: "short" collapses sub-tables to dotted keys, "long" expands to [table.subtable] headers
table_format = "short"

# Extra newlines between sub-tables in the same group (e.g. "\n" for one blank line between sub-tables)
sub_table_spacing = ""

# Extra newlines between root table groups (e.g. "\n" for one blank line, "\n\n" for two)
separate_root_table = "\n"

# List of tables to force expand regardless of table_format setting
expand_tables = []

# List of tables to force collapse regardless of table_format or expand_tables settings
collapse_tables = []

# List of key patterns to skip string wrapping (supports wildcards like *.parse or tool.bumpversion.*)
skip_wrap_for_keys = []

If not set they will default to values from the CLI.

Shared configuration file

You can place formatting settings in a standalone pyproject-fmt.toml file instead of (or in addition to) the [tool.pyproject-fmt] table. This is useful for monorepos or when you want to share the same configuration across multiple projects without duplicating it in each pyproject.toml.

The formatter searches for pyproject-fmt.toml starting from the directory of the file being formatted and walking up to the filesystem root. The first match wins. You can also pass an explicit path via --config:

pyproject-fmt --config /path/to/pyproject-fmt.toml pyproject.toml

The shared config file uses the same keys as the [tool.pyproject-fmt] table, but without the table header:

column_width = 120
indent = 2
table_format = "short"
sub_table_spacing = ""
separate_root_table = "\n"
max_supported_python = "3.14"

When both a shared config file and a [tool.pyproject-fmt] table exist, per-file settings from the [tool.pyproject-fmt] table take precedence over the shared config file.

Python version classifiers

This tool will automatically generate the Programming Language :: Python :: 3.X classifiers for you. To do so it needs to know the range of Python interpreter versions you support:

• The lower bound can be set via the requires-python key in the pyproject.toml configuration file (defaults to the oldest non end of line CPython at the time of the release).

• The upper bound, by default, will assume the latest stable release of CPython at the time of the release, but can be changed via CLI flag or the config file.

Table formatting

Note

Table formatting options are available in version 2.12.0 and later.

You can control how sub-tables are formatted in your pyproject.toml file. There are two formatting styles:

Short format (collapsed) - The default behavior where sub-tables are collapsed into dotted keys. Use this for a compact representation:

[project]
name = "myproject"
urls.homepage = "https://example.com"
urls.repository = "https://github.com/example/myproject"
scripts.mycli = "mypackage:main"

Long format (expanded) - Sub-tables are expanded into separate [table.subtable] sections. Use this for readability when tables have many keys or complex values:

[project]
name = "myproject"

[project.urls]
homepage = "https://example.com"
repository = "https://github.com/example/myproject"

[project.scripts]
mycli = "mypackage:main"

Table spacing

The sub_table_spacing and separate_root_table options control the blank lines inserted between tables. Each option takes a string of \n characters where each \n adds one blank line:

• sub_table_spacing (default "") controls spacing between sub-tables within the same group. For example, between [tool.ruff] and [tool.ruff.lint]. Set to "\n" to add a blank line between sub-tables.

• separate_root_table (default "\n") controls spacing between different root table groups. For example, between [project] and [tool.ruff].

[tool.pyproject-fmt]
sub_table_spacing = "\n"  # Add blank line between sub-tables
separate_root_table = "\n"  # One blank line between root table groups (default)

Configuration priority

The formatting behavior is determined by a priority system that allows you to set a global default while overriding specific tables:

1. collapse_tables - Highest priority, forces specific tables to be collapsed regardless of other settings

2. expand_tables - Medium priority, forces specific tables to be expanded

3. table_format - Lowest priority, sets the default behavior for all tables not explicitly configured

This three-tier approach lets you fine-tune formatting for specific tables while maintaining a consistent default. For example:

[tool.pyproject-fmt]
table_format = "short"  # Collapse most tables
expand_tables = ["project.entry-points"]  # But expand entry-points

Specificity rules

Table selectors follow CSS-like specificity rules: more specific selectors win over less specific ones. When determining whether to collapse or expand a table, the formatter checks from most specific to least specific until it finds a match.

For example, with this configuration:

[tool.pyproject-fmt]
table_format = "long"  # Expand all tables by default
collapse_tables = ["project"]  # Collapse project sub-tables
expand_tables = ["project.optional-dependencies"]  # But expand this specific one

The behavior will be:

• project.urls → collapsed (matches project in collapse_tables)

• project.scripts → collapsed (matches project in collapse_tables)

• project.optional-dependencies → expanded (matches exactly in expand_tables, more specific than project)

• tool.ruff.lint → expanded (no match in collapse/expand, uses table_format default)

This allows you to set broad rules for parent tables while making exceptions for specific sub-tables. The specificity check walks up the table hierarchy: for project.optional-dependencies, it first checks if project.optional-dependencies is in collapse_tables or expand_tables, then checks project, then falls back to the table_format default.

Supported tables

The following sub-tables can be formatted with this configuration:

Project tables:

• project.urls - Project URLs (homepage, repository, documentation, changelog)

• project.scripts - Console script entry points

• project.gui-scripts - GUI script entry points

• project.entry-points - Custom entry point groups

• project.optional-dependencies - Optional dependency groups

Tool tables:

• tool.ruff.format - Ruff formatter settings

• tool.ruff.lint - Ruff linter settings

• Any other tool sub-tables

Array of tables:

• project.authors - Can be inline tables or [[project.authors]]

• project.maintainers - Can be inline tables or [[project.maintainers]]

• Any [[table]] entries throughout the file

Array of tables ([[table]]) are automatically collapsed to inline arrays when each inline table fits within the configured column_width. For example:

# Before
[[tool.commitizen.customize.questions]]
type = "list"

[[tool.commitizen.customize.questions]]
type = "input"

# After (with table_format = "short")
[tool.commitizen]
customize.questions = [{ type = "list" }, { type = "input" }]

If any inline table exceeds column_width, the array of tables remains in [[...]] format to maintain readability and TOML 1.0.0 compatibility (inline tables cannot span multiple lines).

String wrapping

By default, the formatter wraps long strings that exceed the column width using line continuations. However, some strings such as regex patterns should not be wrapped because wrapping can break their functionality.

You can configure which keys should skip string wrapping using the skip_wrap_for_keys option:

[tool.pyproject-fmt]
skip_wrap_for_keys = ["*.parse", "*.regex", "tool.bumpversion.*"]

Pattern matching

The skip_wrap_for_keys option supports glob-like patterns:

• Exact match: tool.bumpversion.parse matches only that specific key

• Wildcard suffix: *.parse matches any key ending with .parse (e.g., tool.bumpversion.parse, project.parse)

• Wildcard prefix: tool.bumpversion.* matches any key under tool.bumpversion (e.g., tool.bumpversion.parse, tool.bumpversion.serialize)

• Global wildcard: * skips wrapping for all strings

Examples: ["*.parse", "*.regex"] to preserve regex fields, ["tool.bumpversion.*"] for a specific tool section, or ["*"] to skip all string wrapping.

pyproject-fmt is an opinionated formatter, much like black is for Python code. The tool intentionally provides minimal configuration options because the goal is to establish a single standard format that all pyproject.toml files follow.

Benefits of this approach:

• Less time configuring tools

• Smaller diffs when committing changes

• Easier code reviews since formatting is never a question

While a few key options exist (column_width, indent, table_format, sub_table_spacing, separate_root_table), the tool does not expose dozens of toggles. You get what the maintainers have chosen to be the right balance of readability, consistency, and usability. The column_width setting controls when arrays are split into multiple lines and when string values are wrapped using line continuations.

General Formatting

These rules apply uniformly across the entire pyproject.toml file.

Table Ordering

Tables are reordered into a consistent structure:

1. [build-system]

2. [project]

3. [dependency-groups]

4. [tool.*] sections in the order:

   1. Build backends: poetry, poetry-dynamic-versioning, pdm, setuptools, distutils, setuptools_scm, hatch, flit, scikit-build, meson-python, maturin, pixi, whey, py-build-cmake, sphinx-theme-builder, uv

   2. Builders: cibuildwheel, nuitka

   3. Linters/formatters: autopep8, black, ruff, isort, flake8, pycln, nbqa, pylint, repo-review, codespell, docformatter, pydoclint, tomlsort, check-manifest, check-sdist, check-wheel-contents, deptry, pyproject-fmt, typos, bandit

   4. Type checkers: mypy, pyrefly, pyright, ty, django-stubs

   5. Testing: pytest, pytest_env, pytest-enabler, coverage

   6. Task runners: doit, spin, tox

   7. Release tools: bumpversion, jupyter-releaser, tbump, towncrier, vendoring

   8. Any other tool.* in alphabetical order

5. Any other tables (alphabetically)

String Quotes

All strings use double quotes by default. Single quotes are only used when the value contains double quotes:

# Before
name = 'my-package'
description = "He said \"hello\""

# After
name = "my-package"
description = 'He said "hello"'

Key Quotes

TOML keys are normalized to the simplest valid form. Keys that are valid bare keys (containing only A-Za-z0-9_-) have redundant quotes stripped. Single-quoted (literal) keys that require quoting are converted to double-quoted (basic) strings with proper escaping. This applies to all keys: table headers, key-value pairs, and inline table keys:

# Before
[tool."ruff"]
"line-length" = 120
lint.per-file-ignores.'tests/*' = ["S101"]

# After
[tool.ruff]
line-length = 120
lint.per-file-ignores."tests/*" = ["S101"]

Backslashes and double quotes within literal keys are escaped during conversion:

# Before
lint.per-file-ignores.'path\to\file' = ["E501"]

# After
lint.per-file-ignores."path\\to\\file" = ["E501"]

Array Formatting

Arrays are formatted based on line length, trailing comma presence, and comments:

# Short arrays stay on one line
keywords = ["python", "toml"]

# Long arrays that exceed column_width are expanded and get a trailing comma
dependencies = [
    "requests>=2.28",
    "click>=8.0",
]

# Trailing commas signal intent to keep multiline format
classifiers = [
    "Development Status :: 4 - Beta",
]

# Arrays with comments are always multiline
lint.ignore = [
    "E501",  # Line too long
    "E701",
]

Multiline formatting rules:

An array becomes multiline when any of these conditions are met:

1. Trailing comma present - A trailing comma signals intent to keep multiline format

2. Exceeds column width - Arrays longer than column_width are expanded (and get a trailing comma added)

3. Contains comments - Arrays with inline or leading comments are always multiline

String Wrapping

Strings that exceed column_width (including the key name and " = " prefix) are wrapped into multi-line triple-quoted strings using line continuations:

# Before (exceeds column_width)
description = "A very long description that goes beyond the configured column width limit"

# After
description = """\
  A very long description that goes beyond the \
  configured column width limit\
  """

Wrapping prefers breaking at spaces and at " :: " separators (common in Python classifiers). Strings inside inline tables are never wrapped. Strings that contain actual newlines are preserved as multi-line strings without adding line continuations. Use skip_wrap_for_keys to prevent wrapping for specific keys.

Table Formatting

Sub-tables can be formatted in two styles controlled by table_format:

Short format (collapsed to dotted keys):

[project]
urls.homepage = "https://example.com"
urls.repository = "https://github.com/example/project"

Long format (expanded to table headers):

[project.urls]
homepage = "https://example.com"
repository = "https://github.com/example/project"

Table spacing:

By default, different table groups (e.g. [project] and [tool.ruff]) are separated by a blank line, while sub-tables within the same group (e.g. [tool.ruff] and [tool.ruff.lint]) are kept compact with no blank line between them. You can control this with sub_table_spacing and separate_root_table. Each option takes a string of \n characters where each \n adds one blank line. For example, setting sub_table_spacing = "\n" adds a blank line between sub-tables:

[tool.ruff]
line-length = 120

[tool.ruff.lint]
select = ["E", "W"]

Comment Preservation

All comments are preserved during formatting:

• Inline comments - Comments after a value on the same line stay with that value

• Leading comments - Comments on the line before an entry stay with the entry below

• Block comments - Multi-line comment blocks are preserved

Inline comment alignment:

Inline comments within arrays are aligned independently per array, based on that array’s longest value:

# Before - comments at inconsistent positions
lint.ignore = [
  "COM812", # Conflict with formatter
  "CPY", # No copyright statements
  "ISC001",   # Another rule
]

# After - comments align to longest value in this array
lint.ignore = [
  "COM812",  # Conflict with formatter
  "CPY",     # No copyright statements
  "ISC001",  # Another rule
]

Table-Specific Handling

Beyond general formatting, each table has specific key ordering and value normalization rules.

[build-system]

Key ordering: build-backend → requires → backend-path

Value normalization:

• requires: Dependencies normalized per PEP 508 and sorted alphabetically by package name

• backend-path: Entries sorted alphabetically

# Before
[build-system]
requires = ["setuptools >= 45", "wheel"]
build-backend = "setuptools.build_meta"

# After
[build-system]
build-backend = "setuptools.build_meta"
requires = ["setuptools>=45", "wheel"]

[project]

Key ordering:

Keys are reordered in this sequence: name → version → import-names → import-namespaces → description → readme → keywords → license → license-files → maintainers → authors → requires-python → classifiers → dynamic → dependencies → optional-dependencies → urls → scripts → gui-scripts → entry-points

Field normalizations:

name

Converted to canonical format (lowercase with hyphens): My_Package → my-package

description

Whitespace normalized: multiple spaces collapsed, consistent spacing after periods.

license

License expression operators (and, or, with) uppercased: MIT or Apache-2.0 → MIT OR Apache-2.0

requires-python

Whitespace removed: >= 3.9 → >=3.9

keywords

Deduplicated (case-insensitive) and sorted alphabetically.

dynamic

Sorted alphabetically.

import-names / import-namespaces

Semicolon spacing normalized (foo;bar → foo; bar), entries sorted alphabetically.

classifiers

Deduplicated and sorted alphabetically.

authors / maintainers

Sorted by name, then email. Keys within each entry ordered: name → email.

Dependency normalization:

All dependency arrays (dependencies, optional-dependencies.*) are:

• Normalized per PEP 508: spaces removed, redundant .0 suffixes stripped (unless keep_full_version = true)

• Sorted alphabetically by canonical package name

# Before
dependencies = ["requests >= 2.0.0", "click~=8.0"]

# After
dependencies = ["click>=8", "requests>=2"]

Optional dependencies extra names:

Extra names are normalized to lowercase with hyphens:

# Before
[project.optional-dependencies]
Dev_Tools = ["pytest"]

# After
[project.optional-dependencies]
dev-tools = ["pytest"]

Python version classifiers:

Classifiers for Python versions are automatically generated based on requires-python and max_supported_python. Disable with generate_python_version_classifiers = false.

# With requires-python = ">=3.10" and max_supported_python = "3.14"
classifiers = [
    "Programming Language :: Python :: 3 :: Only",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Programming Language :: Python :: 3.14",
]

Entry points:

Inline tables within entry-points are expanded to dotted keys:

# Before
entry-points.console_scripts = { mycli = "mypackage:main" }

# After
entry-points.console_scripts.mycli = "mypackage:main"

Authors/maintainers formatting:

Contact information can be formatted as inline tables or expanded array of tables:

# Short format (inline)
authors = [{ name = "Alice", email = "[e-mail]" }]

# Long format (array of tables)
[[project.authors]]
name = "Alice"
email = "[e-mail]"

Controlled by table_format, expand_tables, and collapse_tables.

[dependency-groups]

Key ordering: dev → test → type → docs → others alphabetically

Value normalization:

• All dependencies normalized per PEP 508

• Sorted: regular dependencies first, then include-group entries

# Before
[dependency-groups]
dev = [{ include-group = "test" }, "ruff>=0.4", "mypy>=1"]

# After
[dependency-groups]
dev = ["mypy>=1", "ruff>=0.4", { include-group = "test" }]

[tool.ruff]

Key ordering:

Keys are reordered in a logical sequence:

1. Global settings: required-version → extend → target-version → line-length → indent-width → tab-size

2. Path settings: builtins → namespace-packages → src → include → extend-include → exclude → extend-exclude → force-exclude → respect-gitignore

3. Behavior flags: preview → fix → unsafe-fixes → fix-only → show-fixes → show-source

4. Output settings: output-format → cache-dir

5. format.* keys

6. lint.* keys: select → extend-select → ignore → extend-ignore → per-file-ignores → fixable → unfixable → plugin configurations

Sorted arrays:

Arrays are sorted alphabetically using natural ordering (RUF1 < RUF9 < RUF10):

# These arrays are sorted:
lint.select = ["E", "F", "I", "RUF"]
lint.ignore = ["E501", "E701"]

# Per-file-ignores values are also sorted:
lint.per-file-ignores."tests/*.py" = ["D103", "S101"]

Sorted array keys:

Top-level:

exclude, extend-exclude, include, extend-include, builtins, namespace-packages, src

Format:

format.exclude

Lint:

select, extend-select, ignore, extend-ignore, fixable, extend-fixable, unfixable, extend-safe-fixes, extend-unsafe-fixes, external, task-tags, exclude, typing-modules, allowed-confusables, logger-objects

Per-file patterns:

lint.per-file-ignores.*, lint.extend-per-file-ignores.*

Plugin arrays:

lint.flake8-bandit.hardcoded-tmp-directory, lint.flake8-bandit.hardcoded-tmp-directory-extend, lint.flake8-boolean-trap.extend-allowed-calls, lint.flake8-bugbear.extend-immutable-calls, lint.flake8-builtins.builtins-ignorelist, lint.flake8-gettext.extend-function-names, lint.flake8-gettext.function-names, lint.flake8-import-conventions.banned-from, lint.flake8-pytest-style.raises-extend-require-match-for, lint.flake8-pytest-style.raises-require-match-for, lint.flake8-self.extend-ignore-names, lint.flake8-self.ignore-names, lint.flake8-tidy-imports.banned-module-level-imports, lint.flake8-type-checking.exempt-modules, lint.flake8-type-checking.runtime-evaluated-base-classes, lint.flake8-type-checking.runtime-evaluated-decorators, lint.isort.constants, lint.isort.default-section, lint.isort.extra-standard-library, lint.isort.forced-separate, lint.isort.no-lines-before, lint.isort.required-imports, lint.isort.single-line-exclusions, lint.isort.variables, lint.pep8-naming.classmethod-decorators, lint.pep8-naming.extend-ignore-names, lint.pep8-naming.ignore-names, lint.pep8-naming.staticmethod-decorators, lint.pydocstyle.ignore-decorators, lint.pydocstyle.property-decorators, lint.pyflakes.extend-generics, lint.pylint.allow-dunder-method-names, lint.pylint.allow-magic-value-types

[tool.pixi]

Key ordering:

Keys are grouped by functionality:

1. Workspace metadata: workspace.name → workspace.version → workspace.description → workspace.authors → workspace.license → workspace.license-file → workspace.readme → workspace.homepage → workspace.repository → workspace.documentation

2. Workspace configuration: workspace.channels → workspace.platforms → workspace.channel-priority → workspace.solve-strategy → workspace.conda-pypi-map → workspace.requires-pixi → workspace.exclude-newer → workspace.preview → workspace.build-variants → workspace.build-variants-files

3. Dependencies: dependencies → host-dependencies → build-dependencies → run-dependencies → constraints → pypi-dependencies → pypi-options

4. Development: dev

5. Environment setup: system-requirements → activation → tasks

6. Targeting: target → feature → environments

7. Package build: package

Sorted arrays:

workspace.channels, workspace.platforms, workspace.preview, workspace.build-variants-files

[tool.uv]

Key ordering:

Keys are grouped by functionality:

1. Version & Python: required-version → python-preference → python-downloads

2. Dependencies: dev-dependencies → default-groups → dependency-groups → constraint-dependencies → override-dependencies → exclude-dependencies → dependency-metadata

3. Sources & indexes: sources → index → index-url → extra-index-url → find-links → no-index → index-strategy → keyring-provider

4. Package handling: no-binary* → no-build* → no-sources* → reinstall* → upgrade*

5. Resolution: resolution → prerelease → fork-strategy → environments → required-environments → exclude-newer*

6. Build & Install: compile-bytecode → link-mode → config-settings* → extra-build-* → concurrent-builds → concurrent-downloads → concurrent-installs

7. Network & Security: allow-insecure-host → native-tls → offline → no-cache → cache-dir → http-proxy → https-proxy → no-proxy

8. Publishing: publish-url → check-url → trusted-publishing

9. Python management: python-install-mirror → pypy-install-mirror → python-downloads-json-url

10. Workspace & Project: managed → package → workspace → conflicts → cache-keys → build-backend

11. Other: pip → preview → torch-backend

Sorted arrays:

Package name arrays (sorted alphabetically):

constraint-dependencies, override-dependencies, dev-dependencies, exclude-dependencies, no-binary-package, no-build-package, no-build-isolation-package, no-sources-package, reinstall-package, upgrade-package

Other arrays:

environments, required-environments, allow-insecure-host, no-proxy, workspace.members, workspace.exclude

Sources table:

The sources table entries are sorted alphabetically by package name:

# Before
[tool.uv.sources]
zebra = { git = "..." }
alpha = { path = "..." }

# After
[tool.uv.sources]
alpha = { path = "..." }
zebra = { git = "..." }

pip subsection:

The [tool.uv.pip] subsection follows similar formatting rules, with arrays like extra, no-binary-package, no-build-package, reinstall-package, and upgrade-package sorted alphabetically.

[tool.coverage]

Key ordering:

Keys are reordered to follow coverage.py’s workflow phases:

1. Run phase (run.*): Data collection settings

   • Source selection: source → source_pkgs → source_dirs

   • File filtering: include → omit

   • Measurement: branch → cover_pylib → timid

   • Execution context: command_line → concurrency → context → dynamic_context

   • Data management: data_file → parallel → relative_files

   • Extensions: plugins

   • Debugging: debug → debug_file → disable_warnings

   • Other: core → patch → sigterm

2. Paths (paths.*): Path mapping between source locations

3. Report phase (report.*): General reporting

   • Thresholds: fail_under → precision

   • File filtering: include → omit → include_namespace_packages

   • Line exclusion: exclude_lines → exclude_also

   • Partial branches: partial_branches → partial_also

   • Output control: skip_covered → skip_empty → show_missing

   • Formatting: format → sort

   • Error handling: ignore_errors

4. Output formats (after report):

   • html.*: directory → title → extra_css → show_contexts → skip_covered → skip_empty

   • json.*: output → pretty_print → show_contexts

   • lcov.*: output → line_checksums

   • xml.*: output → package_depth

Grouping principle:

Related options are grouped together:

• File selection: include/omit are adjacent

• Exclusion patterns: exclude_lines/exclude_also are adjacent

• Partial branches: partial_branches/partial_also are adjacent

• Skip options: skip_covered/skip_empty are adjacent

Sorted arrays:

Run phase:

source, source_pkgs, source_dirs, include, omit, concurrency, plugins, debug, disable_warnings

Report phase:

include, omit, exclude_lines, exclude_also, partial_branches, partial_also

# Before (alphabetical)
[tool.coverage]
report.exclude_also = ["if TYPE_CHECKING:"]
report.omit = ["tests/*"]
run.branch = true
run.omit = ["tests/*"]

# After (workflow order with groupings)
[tool.coverage]
run.branch = true
run.omit = ["tests/*"]
report.omit = ["tests/*"]
report.exclude_also = ["if TYPE_CHECKING:"]

[tool.commitizen]

Top-level ordering: rule selection (name, schema, schema_pattern, allowed_prefixes) → version source (version, version_scheme, version_provider, version_files) → bump behavior → tag/sign → changelog → hooks (pre_bump_hooks, post_bump_hooks) → customize.

Sorted arrays: version_files, allowed_prefixes, extras, extra_files.

[tool.poetry]

Covers both Poetry 1.x (legacy metadata under [tool.poetry]) and Poetry 2.x (metadata moved to standard [project]; Poetry-specific keys still under [tool.poetry]).

Top-level key ordering:

1. Identity: name → version → description → package-mode

2. License & authorship: license → authors → maintainers

3. Documentation: readme → homepage → repository → documentation

4. Discovery: keywords → classifiers

5. Packaging contents: packages → include → exclude → build

6. Dependencies (sub-tables): dependencies → dev-dependencies → group → extras

7. Entry points / distribution: scripts → plugins → urls → source

8. Poetry runtime constraints: requires-poetry → requires-plugins → build-constraints

Sub-table key ordering:

[tool.poetry.dependencies] / [tool.poetry.dev-dependencies] / per-group dependencies

python first (interpreter constraint), all other package names alphabetized.

[tool.poetry.group.<name>]

optional → include-groups → dependencies.

[tool.poetry.extras], [tool.poetry.scripts], [tool.poetry.urls], [tool.poetry.plugins.*], [tool.poetry.requires-plugins], [tool.poetry.build-constraints]

Keys alphabetized.

[tool.poetry.build]

script → generate-setup-file.

[[tool.poetry.source]]

Each entry’s keys ordered name → url → priority → links → indexed, with the deprecated default and secondary keys placed last. Array order itself is preserved (priority ordering is semantically significant).

Sorted arrays:

• keywords, classifiers: deduplicated (case-insensitive) and sorted alphabetically.

• exclude: sorted alphabetically.

• [tool.poetry.extras] values (each extras.<name>): sorted alphabetically.

• [tool.poetry.group.<name>.include-groups]: sorted alphabetically.

• Per-dependency extras arrays (in dependencies, dev-dependencies, per-group dependencies, requires-plugins, build-constraints): sorted alphabetically.

Arrays whose order carries semantic meaning are preserved as written: authors, maintainers, packages, include, readme (when an array), multi-constraint dependency arrays, and [[tool.poetry.source]] entries.

Inline-table key ordering:

When a Poetry-specific inline table is detected (via discriminator keys unique to Poetry’s schema), its keys are reordered:

• Sources ({ priority = ... }, { secondary = ... }, { links = ... }, { indexed = ... }): name → url → priority → links → indexed → default → secondary.

• Git dependencies ({ git = ... }): git → branch → tag → rev → subdirectory → python → platform → markers → allow-prereleases → allows-prereleases → optional → extras → develop.

• Path dependencies ({ path = ... }): path → develop → subdirectory → python → platform → markers → optional → extras.

• File dependencies ({ file = ... }): file → subdirectory → python → platform → markers → optional → extras.

Inline tables that don’t match any Poetry-specific schema (for example [[project.authors]] inline form { name = "...", email = "..." }) are left untouched.

# Before
[[tool.poetry.source]]
priority = "primary"
url = "https://pypi.example.com/simple"
name = "private"

[tool.poetry.dependencies]
zebra = "^1.0"
python = "^3.11"
foo = { branch = "main", git = "https://github.com/example/foo" }

# After
[tool.poetry]
dependencies.python = "^3.11"
dependencies.foo = { git = "https://github.com/example/foo", branch = "main" }
dependencies.zebra = "^1.0"
source = [ { name = "private", url = "https://pypi.example.com/simple", priority = "primary" } ]

[tool.mypy]

Covers all documented mypy options plus the [[tool.mypy.overrides]] array of tables. Keys are reordered to match the section structure of the official mypy configuration reference.

Top-level key ordering (sectioned):

1. Import discovery: mypy_path → files → modules → packages → exclude → exclude_gitignore → namespace_packages → explicit_package_bases → ignore_missing_imports → follow_untyped_imports → follow_imports → follow_imports_for_stubs → python_executable → no_site_packages → no_silence_site_packages

2. Platform configuration: python_version → platform → always_true → always_false

3. Disallow dynamic typing: disallow_any_unimported → disallow_any_expr → disallow_any_decorated → disallow_any_explicit → disallow_any_generics → disallow_subclassing_any

4. Untyped definitions and calls: disallow_untyped_calls → untyped_calls_exclude → disallow_untyped_defs → disallow_incomplete_defs → check_untyped_defs → disallow_untyped_decorators

5. None and Optional: implicit_optional → strict_optional

6. Configuring warnings: warn_redundant_casts → warn_unused_ignores → warn_no_return → warn_return_any → warn_unreachable → deprecated_calls_exclude

7. Suppressing errors: ignore_errors

8. Miscellaneous strictness: allow_untyped_globals → allow_redefinition → local_partial_types → disable_error_code → enable_error_code → extra_checks → implicit_reexport → strict_equality → strict_bytes → strict

9. Configuring error messages: show_error_context → show_column_numbers → show_error_end → hide_error_codes → show_error_code_links → pretty → color_output → error_summary → show_absolute_path

10. Incremental mode: incremental → cache_dir → sqlite_cache → cache_fine_grained → skip_version_check → skip_cache_mtime_checks

11. Advanced options: plugins → pdb → show_traceback → raise_exceptions → custom_typing_module → custom_typeshed_dir → warn_incomplete_stub → native_parser

12. Report generation: any_exprs_report → cobertura_xml_report → html_report → linecount_report → linecoverage_report → lineprecision_report → txt_report → xml_report → xslt_html_report → xslt_txt_report

13. Miscellaneous: junit_xml → junit_format → scripts_are_modules → warn_unused_configs → verbosity

14. overrides last.

``[[tool.mypy.overrides]]`` entry key ordering:

module first (required), then per-module overridable keys in the same logical grouping as the parent table (import behavior, platform markers, disallow dynamic typing, untyped defs/calls, optional handling, warnings, suppression, miscellaneous strictness).

Sorted arrays:

• Top-level: files, modules, packages, exclude, always_true, always_false, untyped_calls_exclude, deprecated_calls_exclude, disable_error_code, enable_error_code.

• Inside overrides entries: module (when an array of patterns), always_true, always_false, disable_error_code, enable_error_code.

plugins and mypy_path are deliberately preserved as written: plugins run in declared order and reordering changes behavior; mypy_path is a search path with priority semantics.

Inline-table handling:

When [[tool.mypy.overrides]] collapses to overrides = [{...}, {...}] under the default table_format = "short", key order inside each entry is normalized via discriminators unique to mypy (disable_error_code / enable_error_code / ignore_missing_imports / follow_untyped_imports / ignore_errors / warn_unused_ignores / disallow_untyped_defs / check_untyped_defs). The arrays inside each inline entry are sorted in place, so disable_error_code = [...] is alphabetized whether the override is expanded or collapsed.

# Before
[[tool.mypy.overrides]]
ignore_missing_imports = true
disable_error_code = ["import-untyped", "attr-defined"]
module = "third_party.*"

# After
[tool.mypy]
overrides = [
  { module = "third_party.*", ignore_missing_imports = true, disable_error_code = [ "attr-defined", "import-untyped" ] },
]

[tool.setuptools] and [tool.setuptools_scm]

Covers the setuptools build backend and the version-from-SCM plugin.

``[tool.setuptools]`` top-level key ordering (grouped):

1. Packaging discovery: py-modules → packages.find.* / packages.find-namespace.* → packages → package-dir

2. Package data: include-package-data → package-data → exclude-package-data

3. Dynamic metadata: dynamic

4. Extensions / build customization: ext-modules → cmdclass

5. Distribution metadata: platforms → provides → obsoletes → license-files

6. Data files: data-files

7. Deprecated / obsolete (pushed last): script-files → namespace-packages → zip-safe → eager-resources → dependency-links

``[tool.setuptools.packages.find]`` / ``[tool.setuptools.packages.find-namespace]`` inner ordering:

where → include → exclude → namespaces.

``[tool.setuptools.package-data]`` / ``[tool.setuptools.exclude-package-data]`` / ``[tool.setuptools.data-files]`` ordering:

The catch-all "*" pattern always goes first, then the other package patterns alphabetically. Each value (an array of glob patterns) is sorted alphabetically.

``[tool.setuptools.dynamic]`` ordering:

Field names alphabetized. Inline-table directives (e.g. version = { attr = "pkg.__version__" } or readme = { file = "README.md", content-type = "text/markdown" }) get their keys ordered attr → file → content-type.

Sorted arrays:

• py-modules, platforms, provides, obsoletes, script-files, namespace-packages, eager-resources: alphabetized.

• packages.find.include / packages.find.exclude / packages.find-namespace.*: alphabetized.

• Values inside package-data / exclude-package-data / data-files tables: alphabetized.

Arrays whose order is meaningful are preserved as written: packages (literal list — first match wins), license-files (PEP 639 concatenation order), and everything under [[tool.setuptools.ext-modules]] (compiler and linker argv arrays).

``[tool.setuptools_scm]`` key ordering (grouped):

1. Version output: version_file → version_file_template

2. Version computation: version_scheme → local_scheme → version_cls → normalize

3. Root discovery: root → relative_to → fallback_root → parent → search_parent_directories → dist_name

4. Tag / parse: tag_regex → parse → parentdir_prefix_version → fallback_version

5. Nested SCM-specific tables: scm.git.pre_parse → scm.git.describe_command

6. Deprecated (pushed last): git_describe_command (use scm.git.describe_command) → write_to (use version_file) → write_to_template (use version_file_template) → version_class (use version_cls) → template

# Before
[tool.setuptools]
zip-safe = false
py-modules = ["foo", "bar"]
packages = ["my_pkg"]

[tool.setuptools.packages.find]
namespaces = true
where = ["src"]
include = ["my_pkg*"]

[tool.setuptools.dynamic]
readme = { content-type = "text/markdown", file = "README.md" }

# After
[tool.setuptools]
py-modules = [ "bar", "foo" ]
packages.find.where = [ "src" ]
packages.find.include = [ "my_pkg*" ]
packages.find.namespaces = true
packages = [ "my_pkg" ]
dynamic.readme = { file = "README.md", content-type = "text/markdown" }
zip-safe = false

[tool.pytest.ini_options]

Covers the pytest configuration block. Keys are grouped to follow the pytest reference: pytest itself → discovery → CLI arguments → markers/parametrize → warnings → doctest → output → logging (capture / CLI / file) → JUnit XML → cache and tmp_path → assertion / faulthandler.

Sorted arrays (set/unordered semantics):

testpaths, norecursedirs, collect_ignore, collect_ignore_glob, python_files, python_classes, python_functions, markers, filterwarnings, doctest_optionflags, usefixtures, required_plugins.

addopts and pythonpath are deliberately preserved as written: addopts is CLI argv (order matters) and pythonpath is a search path with priority semantics.

# Before
[tool.pytest.ini_options]
log_cli_level = "INFO"
markers = [ "slow: marks tests as slow", "fast: marks tests as fast" ]
addopts = [ "--strict-markers", "-ra" ]
testpaths = [ "tests" ]
minversion = "8"

# After
[tool.pytest]
ini_options.minversion = "8"
ini_options.testpaths = [ "tests" ]
ini_options.addopts = [ "--strict-markers", "-ra" ]
ini_options.markers = [ "fast: marks tests as fast", "slow: marks tests as slow" ]
ini_options.log_cli_level = "INFO"

[tool.black]

Black’s configuration is small but ubiquitous. Keys are ordered: required-version → target-version → line-length → include / extend-exclude / force-exclude / exclude → behavior flags (skip-string-normalization, skip-magic-trailing-comma, preview, unstable, enable-unstable-feature, fast, workers) → output (color, verbose, quiet).

Sorted arrays:

• target-version: alphabetized so py39 precedes py310 etc.

• enable-unstable-feature: alphabetized.

The include / exclude family are regex strings, not arrays, so they’re left as-is.

[tool.hatch.*]

Hatch configuration spans many sub-tables. Keys at [tool.hatch] level (which after collapse appear as dotted version.* / build.* / metadata.* / envs.* / publish.* / workspace.*) are ordered:

1. Version: version.source → version.path → version.pattern → version.expression → version.scheme → version.validate-bump → version.fallback-version → version.raw-options.

2. Metadata: metadata.allow-direct-references → metadata.allow-ambiguous-features → metadata.hooks.

3. Build: build.dev-mode-dirs → build.directory → build.sources → build.packages → build.include → build.exclude → build.force-include → build.artifacts → build.ignore-vcs → build.skip-excluded-dirs → build.reproducible → build.hooks → wheel target (packages, include, exclude, force-include, artifacts, hooks, shared-data, extra-metadata, etc.) → sdist target (include, exclude, force-include, support-legacy, strict-naming).

4. Publish: publish.index.disable → publish.index.repos → publish.index.

5. Workspace: workspace.members → workspace.exclude.

6. Environments (envs.<name>.*): each environment’s keys follow type → template → detached → description → platforms → python → path → installer → skip-install → system-packages → dev-mode → features → dependencies → extra-dependencies → extra-args → pre-install-commands → post-install-commands → env-include → env-exclude → env-vars → scripts → matrix → matrix-name-format → overrides.

Sorted arrays:

• Build: include, exclude, force-include, artifacts, packages, sources, dev-mode-dirs, and the matching build.targets.wheel.* / build.targets.sdist.* arrays.

• Environments: per-env dependencies, extra-dependencies, features, platforms, env-include, env-exclude, pre-install-commands, post-install-commands.

• Workspace: members, exclude.

scripts and env-vars sub-tables under each environment have their inner keys alphabetized. Build hook order and matrix entry order are preserved as written (both carry semantic meaning).

[tool.isort]

Covers the isort import sorter. profile first (it sets defaults that everything else overrides), then output style (line/wrap/indent/multi-line options), then known sources (sections → default_section → known_standard_library / extra_standard_library / known_third_party / known_first_party / known_local_folder / known_other), then forced separation, skip patterns, import add/remove, and section heading comments.

Sorted arrays:

known_standard_library, extra_standard_library, known_third_party, known_first_party, known_local_folder, known_other, namespace_packages, src_paths, skip, skip_glob, extend_skip, extend_skip_glob, supported_extensions, blocked_extensions, single_line_exclusions, forced_separate, treat_comments_as_code, treat_all_comments_as_code, constants, variables.

Order-sensitive arrays preserved as written: sections (output section sequence), no_lines_before, add_imports, remove_imports, required_imports, force_to_top.

[tool.pyright] and [tool.basedpyright]

Both type checkers share the same configuration schema. Keys are ordered: platform/interpreter (pythonVersion → pythonPlatform → pythonPath → venv → venvPath → typeshedPath → stubPath) → mode flags (typeCheckingMode → strict → failOnWarnings → useLibraryCodeForTypes) → paths (include → exclude → ignore → extraPaths) → strict-flavor toggles (strictListInference, strictDictionaryInference, strictSetInference, strictParameterNoneValue, enableExperimentalFeatures, enableTypeIgnoreComments, analyzeUnannotatedFunctions, disableBytesTypePromotions, deprecateTypingAliases) → defineConstant → all ``report*`` rules alphabetized → executionEnvironments (last).

The report* rules (70+ in pyright; basedpyright adds more) are collected from the input and inserted alphabetically rather than hardcoded, so new diagnostic rules don’t require formatter changes.

Sorted arrays: include, exclude, ignore, extraPaths, strict.

[tool.pdm.*]

Covers PDM. Top-level ordering: distribution / package-type / plugins → resolution → version → build → scripts → source → dev-dependencies → publish → options.

Sub-table ordering (collapsed to dotted keys):

• version: source → path → getter → write_to → write_template → tag_regex → tag_filter → fallback_version → version_format.

• build: includes → excludes → source-includes → package-dir → is-purelib → run-setuptools → custom-hook → editable-backend.

• [[tool.pdm.source]] (AoT, preserve array order): per-entry name → url → type → verify_ssl → include_packages → exclude_packages.

Sorted arrays: plugins, build.includes, build.excludes, build.source-includes, resolution.excludes, every dev-dependencies.<group> value array, and include_packages / exclude_packages inside source entries.

[tool.cibuildwheel]

Covers cibuildwheel. Top-level ordering: selection (build, skip, test-skip, archs, enable, free-threaded-support) → build configuration (build-frontend, build-verbosity, config-settings, dependency-versions, environment, environment-pass) → build phases (before-all, before-build, repair-wheel-command) → test phases (before-test, test-command, test-requires, test-extras, test-groups, test-sources) → platform images (manylinux-*-image, musllinux-*-image) → container-engine → per-platform sub-tables (linux, macos, windows, android, ios, pyodide) → overrides last.

Per-platform sub-tables follow the same inner ordering. [[tool.cibuildwheel.overrides]] entries place select first (required), then the regular cibuildwheel keys; the array order itself is preserved (later overrides win).

Sorted arrays: enable, test-extras, test-groups.

Most other array-valued keys (test-requires, before-all, test-command, the various environment* fields) are CLI argv or ordered lists and are preserved as written.

[tool.tox]

Reuses the rules from tox-toml-fmt so a [tool.tox] block in pyproject.toml is formatted identically to a standalone tox.toml: alias normalization (envlist → env_list, setenv → set_env, etc.), canonical key ordering for the root table and every env table, PEP 508 requirement normalization and sorting in deps and constraints, sorted pass_env (inline-table entries first), version-aware env_list sorting (py313 before py312 before py311), and inline-table reordering for replace, prefix, product, and value directives.

See the tox-toml-fmt documentation for the full schema and per-key behavior; the only difference here is the namespace (tool.tox instead of the root table).

[tool.bandit]

Top-level ordering: exclude_dirs → targets → tests → skips → per-plugin sub-tables (assert_used, hardcoded_tmp_directory, etc.).

All array values alphabetize (rule IDs, directory paths, function-name lists — all set semantics).

[tool.maturin]

Maturin builds Rust extensions for Python. Top-level ordering: module identity (module-name, bindings, python-source, python-packages, python-bin-path) → source layout (src, manifest-path, include, exclude, sdist-include, sdist-generator, data) → cargo settings (features, no-default-features, all-features, cargo-extra-args, rustc-extra-args, config, profile, target, target-dir) → compatibility / strip (compatibility, auditwheel, skip-auditwheel, strip, frozen, locked, offline, zig) → behavior (use-cross).

Sorted arrays: python-packages, include, exclude, sdist-include, features (all set-semantics). cargo-extra-args / rustc-extra-args are CLI argv and preserved.

[tool.codespell]

Top-level ordering: dictionaries (builtin, dictionary, ignore-words, ignore-words-list, ignore-regex, ignore-multiline-regex, exclude-file) → scope (skip, uri-ignore-words-list, check-filenames, check-hidden, hidden, regex, user-input) → fix behavior (write-changes, interactive, enable-colors, disable-colors) → output (count, quiet-level, summary).

Sorted arrays: builtin, dictionary, skip, ignore-words-list, uri-ignore-words-list.

[tool.towncrier]

Top-level ordering: package identity (name, version, package, package_dir) → news location (directory, filename, start_string, template, title_format, issue_format, underlines) → rendering (wrap, all_bullets, single_file, orphan_prefix, create_eof_newline, create_add_extension) → behavior (ignore) → type and section (AoT, last).

[[tool.towncrier.type]] entries get keys ordered directory → name → showcontent; [[tool.towncrier.section]] entries get path → name → showcontent. Array order is preserved (display order in the rendered changelog).

Sorted arrays: ignore (file globs to skip).

[tool.pylint.*]

Sub-table order: main (and legacy alias master) → messages_control → reports → basic → format → design → classes → exceptions → imports → logging → method_args → refactoring → similarities → spelling → string → typecheck → variables → miscellaneous.

Sorted arrays: enable, disable, load-plugins, extension-pkg-allow-list, extension-pkg-whitelist, ignore, ignore-patterns, ignore-paths, ignored-modules, ignored-classes, ignored-argument-names, good-names, bad-names, logging-modules, valid-classmethod-first-arg, valid-metaclass-classmethod-first-arg, callbacks, additional-builtins, allowed-redefined-builtins, preferred-modules, deprecated-modules, known-third-party, known-standard-library, allowed-modules, expected-line-ending-format, overgeneral-exceptions, defining-attr-methods, exclude-protected. Match is on the leaf key name regardless of which sub-table it appears in.

[tool.djlint]

Profile/scope → formatting → linting → ignores → output. Sorted arrays: exclude, extend_exclude, custom_blocks, custom_html, ignore, ignore_blocks.

[tool.yapf]

Single flat table. based_on_style first (it sets defaults), then column_limit, indent_width, continuation_indent_width, then the rest alphabetized.

[tool.check-manifest]

ignore → ignore-bad-ideas → ignore-default-rules. Both ignore and ignore-bad-ideas (file-glob lists) alphabetize.

[tool.pyrefly]

Meta’s type checker. Order: python_version → python_platform → python_interpreter → project_includes → project_excludes → search_path → site_package_path → use_untyped_imports → replace_imports_with_any → ignore_errors_in_generated_code → errors. Path arrays alphabetize.

[tool.semantic_release]

python-semantic-release. Order: tag/version → assets → version source → repo → commit parser → branches → publish → changelog → remote. Sorted arrays: version_variables, version_toml, assets, exclude_commit_patterns.

[tool.scikit-build]

scikit-build-core (CMake builds for Python). Top-level order: meta keys (minimum-version, build-dir, fail, experimental, strict-config) → build → cmake → ninja → sdist → wheel → install → editable → logging / messages → metadata → search → generate AoT → overrides AoT.

Sorted arrays: include, exclude, packages, files, targets, components, exclude-fields. args and define (CLI argv for cmake/ninja) are preserved as written.

[tool.bumpversion]

bump-my-version / legacy bumpversion. Order: identity (current_version) → format (parse, serialize, search, replace, regex, ignore_missing_*) → tag (tag, sign_tags, tag_name, tag_message) → commit (allow_dirty, commit, commit_args, message, moveable_tags) → behavior → files / parts AoT last.

[tool.interrogate]

Docstring coverage. Threshold → ignore flags → exclude → output. Sorted arrays: exclude, extend-exclude, ignore-regex.

[tool.docformatter]

Docstring formatter. Order: behavior (in-place, recursive, check, diff, black, pep257, non-strict) → format width (line-length, wrap-summaries, wrap-descriptions, tab-width) → wrap/summary tweaks → other.

[tool.vulture]

Dead-code finder. Order: paths → ignore (exclude, ignore_names, ignore_decorators) → behavior (make_whitelist, min_confidence, sort_by_size) → output (verbose). Sorted arrays: paths, exclude, ignore_names, ignore_decorators.

[tool.autopep8]

PEP8 auto-fixer. Order: length/indent → mode (in-place, recursive, diff, list-fixes) → rules (ignore, select, exclude) → behavior. Sorted arrays: ignore, select, exclude.

[tool.deptry]

Dependency checker. Order: scope/exclude → ignore rules → per-rule ignores → behavior → mapping. Sorted arrays cover all the ignore_* / exclude / requirements_files / pep621_dev_dependency_groups / known_first_party lists.

[tool.ty]

Astral’s type checker. Order: src → respect-ignore-files → environment → rules → terminal → overrides last. src array alphabetizes. Schema is still pre-1.0; unknown keys alphabetize after the canonical set.

Other Tables

Any unrecognized tables are preserved and reordered according to standard table ordering rules. Keys within unknown tables are not reordered or normalized. Requires-Dist: tomli>=2.4.1; python_version<’3.11’