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PySLFP: Python Sea Level Fingerprints

PyPI version CI Documentation License: BSD-3-Clause

pyslfp computes elastic sea level fingerprints: the spatially variable pattern of sea level change produced when mass is redistributed at the Earth's surface, for example by the melting of an ice sheet. It solves the sea level equation, taking account of the elastic deformation of the solid Earth, gravitational self-consistency between ice, oceans and solid Earth, and rotational feedbacks.

The library covers both the forward problem and its use within inverse problems. Alongside the solvers, it provides the same physics expressed as linear operators between Hilbert spaces, together with observation models for tide gauges, satellite altimetry and GRACE gravimetry. These build on pygeoinf and follow the theory set out in Al-Attar et al. (2024).

Documentation is at pyslfp.readthedocs.io.

Installation

pyslfp requires Python 3.12 or later and is available from PyPI:

pip install pyslfp

Plotting works out of the box. plt.show() needs matplotlib to have an interactive backend, which on a Python built with tkinter — the usual case — it already has. Where tkinter is absent, or if you would rather use Qt:

pip install "pyslfp[interactive]"

For development, clone the repository and use Poetry:

poetry install              # runtime dependencies only
poetry install --with dev   # adds pytest, sphinx, ruff, jupyter and the hooks

See CONTRIBUTING.md for the git hooks, the documentation build and the release process.

Performance and threading

The spherical harmonic transforms dominate the cost of a sea level calculation. They are performed by pyshtools, which uses the multi-threaded ducc0 backend when that package is installed; ducc0 is a declared dependency, so this is the default. The number of threads is read from the OMP_NUM_THREADS environment variable when Python starts (all cores if it is unset).

For a single interactive calculation the default is what you want. When running many independent solves in worker processes, for example through the parallel options of the pygeoinf operators, set OMP_NUM_THREADS=1 before starting Python so that each worker runs single-threaded and the cores are shared between workers rather than oversubscribed. The main process can still use several cores for its serial phases by calling pyslfp.set_num_threads(n) after start-up; workers started afterwards are unaffected, since they read the environment when they start.

Data

The package needs a number of external datasets: a precomputed table of load Love numbers, the ICE-NG ice histories, and shapefiles for the various regional definitions. These are not distributed with the package. They are downloaded from Zenodo automatically, on first use, and then cached locally, so the first call that needs a given dataset will pause while it is fetched and a progress bar is shown. Subsequent calls read from the cache.

By default the cache lives in ~/.pyslfp_data. This can be changed by setting the PYSLFP_DATA environment variable, which is useful on shared machines and in CI. Datasets are fetched individually, so only what is actually used gets downloaded. A dataset that has changed on Zenodo is not fetched again by itself, since the cache is only checked for presence; pyslfp.data.ensure_data("LOVE_NUMBERS", refresh=True) deletes the cached copy and downloads it afresh, and LoveNumbers.default(refresh=True) does the same for the Love number table.

Love numbers

The solid Earth enters the sea level equation through its elastic Love numbers. By default EarthModel uses a precomputed table for PREM, downloaded as above, which the package's own solver produced. It can compute them for any spherically layered model that planetmodel describes, by solving the loading and tidal problem degree by degree on a radial spectral-element mesh:

from planetmodel import PREM
from pyslfp import EarthModel, LoveNumbers

love = LoveNumbers.from_model(PREM(ocean=False), 256)   # a few seconds
love.conventional()["h"]                                 # h' by degree
love.write("prem_256.dat")                               # a file for later
model = EarthModel(256, love_numbers=love)               # or love_numbers="prem_256.dat"

EarthModel.from_planet_model(PREM(ocean=False), 256) does the same in one call. The table carries the radius, surface gravity and gravitational constant of the body it was computed for, and EarthModel takes those from the table so that the sea level equation and its adjoint stay consistent. The numbers are the generalised Love numbers of Al-Attar et al. (2024): the response to the traction and the attraction of a load separately, to a tangential traction, and to a tidal potential, with the tangential displacement numbers alongside the vertical ones. Degree 0 also carries five axial numbers: the response to the spherical mean of the centrifugal potential of a change in spin rate, which goes as $r^2$ rather than being a constant, and the inertia moments of the degree-0 responses, which the axial component of the rotational feedback needs and no surface Love number gives. A model frozen at a frequency with planetmodel.frozen gives complex, viscoelastic numbers, which can be computed and plotted but not yet used in the sea level solver. The precomputed table is exactly what LoveNumbers.from_model gives for PREM(ocean=False) to degree 4096.

Definitions and conventions

The numbers the library holds are not the usual dimensionless ones, so their definition is worth setting down. The solver works with the physical gravitational potential, which is negative near added mass, and with dimensional numbers: a displacement or a potential per unit of the forcing that produced it. A surface load of density $\sigma_{lm} Y_{lm}$ acts in two ways. It presses on the surface with the traction $-g\sigma_{lm} Y_{lm}$, and it attracts the body as a surface mass in Poisson's equation. The generalised Love numbers are the surface response to each acting alone. With the displacement written as $\mathbf{u} = U Y_{lm}\hat{\mathbf{r}} + V \nabla_1 Y_{lm}$ and the potential perturbation as $\phi Y_{lm}$, both at $r = a$,

$$ U = h_l^u \zeta^u_{lm} + h_l^\phi \zeta^\phi_{lm}, \qquad V = l_l^u \zeta^u_{lm} + l_l^\phi \zeta^\phi_{lm}, \qquad \phi = k_l^u \zeta^u_{lm} + k_l^\phi \zeta^\phi_{lm}, $$

where $\zeta^u$ is a surface density that presses but does not attract and $\zeta^\phi$ one that attracts but does not press. A true load does both, so its numbers are the sums

$$ h_l = h_l^u + h_l^\phi, \qquad l_l = l_l^u + l_l^\phi, \qquad k_l = k_l^u + k_l^\phi, $$

which are the properties h, l and k. In SI, $h$ and $l$ are in m³ kg⁻¹ and $k$ in m⁴ kg⁻¹ s⁻². A third channel, the tangential traction $-g\zeta^v_{lm} \nabla_1 Y_{lm}$, has the numbers $h^v_l$, $l^v_l$ and $k^v_l$, and is what the adjoint problem for a functional of horizontal displacement needs. The tidal numbers $h^t_l$, $l^t_l$ and $k^t_l$ are the response to the unit external potential $\psi = (r/a)^l Y_{lm}$, so $h^t$ and $l^t$ are in s² m⁻¹ and $k^t$ is dimensionless.

The conventional dimensionless load numbers $h'_l$, $l'_l$ and $k'l$ of Farrell (1972) refer the response to the direct potential of the load, $4\pi G a\sigma{lm}/(2l+1)$ in the geodetic sign convention, where the potential is positive near mass. They follow from the numbers above by

$$ h'_l = \frac{(2l+1), g}{4\pi G a}, h_l, \qquad l'_l = \frac{(2l+1), g}{4\pi G a}, l_l, \qquad k'_l = -\frac{2l+1}{4\pi G a}, k_l - 1, $$

and the geodetic tidal numbers differ from the library's only by the sign of the potential and a factor of gravity:

$$ k^T_l = k^t_l, \qquad h^T_l = -g, h^t_l, \qquad l^T_l = -g, l^t_l . $$

LoveNumbers.conventional() and LoveNumbers.tidal() return these. The problem is self-adjoint, which gives the reciprocity relations

$$ g, h^\phi_l = k^u_l, \qquad h^v_l = l(l+1), l^u_l, \qquad k^v_l = g, l(l+1), l^\phi_l, $$

the first being eq. (64) of Al-Attar et al. (2024); LoveNumbers.reciprocity_residual() checks all three. Degree 1 is in the centre-of-mass frame, where the surface potential perturbation vanishes and $k'_1 = -1$. At degree 0 the tidal numbers are zero, a uniform external potential being a gauge, while the load numbers are not: mass conservation fixes $k_0 = -4\pi G a$. The sea level solver uses the generalised numbers directly, because the adjoint theory is written in them rather than in $h$ and $k$ alone.

A first calculation

The following melts ten percent of the West Antarctic Ice Sheet and plots the resulting sea level fingerprint. It is a condensed form of Tutorial 1.

import matplotlib.pyplot as plt
import pyslfp as sl

# PREM Earth model with present-day ICE-7G as the background state.
sle = sl.LinearSeaLevelEquation.from_defaults(lmax=256)

# The load associated with a 10% loss of West Antarctic ice.
direct_load = sle.state.west_antarctic_load(fraction=0.1)

# Sea level change, vertical displacement, potential change, and the angular
# velocity change (polar wander and length of day).
sea_level_change, displacement, potential_change, angular_velocity_change = (
    sle.solve_sea_level_equation(direct_load)
)

# Plot the sea level change in metres, masked to the oceans.
length_scale = sle.state.model.parameters.length_scale
fig, ax = sl.create_map_figure(figsize=(12, 6))
sl.plot(
    sea_level_change * sle.state.ocean_projection() * length_scale,
    ax=ax,
    colorbar_kwargs={"label": "Sea level change (m)"},
)
plt.show()

LinearSeaLevelEquation holds the shoreline fixed, which is the usual assumption for present-day and near-future problems. SeaLevelEquation provides the same linear solver along with solve_nonlinear_equation, which migrates the shoreline and returns an updated EarthState, and solve_generalised_equation, which accepts displacement, potential and angular momentum forcings as needed in adjoint calculations.

Units

Calculations are carried out in non-dimensional form. By default lengths, densities and times are scaled so that the Earth's radius, mean density and surface gravity are all equal to one. Results are returned in these units, and are converted back by multiplying by the appropriate scale from state.model.parameters — length_scale for sea level and displacement, load_scale for surface loads, and so on. The scheme itself is set by EarthModelParameters, and can be replaced if a different one suits the problem better.

Operators and inverse problems

The same physics is also exposed as a pygeoinf LinearOperator, so that fingerprints can be composed with observation operators, adjointed, and used within Bayesian inversions. FingerPrintOperator maps a surface load to the four-component response (sea level change, vertical displacement, potential change, angular velocity change), and its domain and codomain may be either Lebesgue or Sobolev spaces, the latter providing regularisation.

import numpy as np
import pyslfp as sl
from pyslfp.linear_operators import FingerPrintOperator, ocean_average_operator

fingerprint = FingerPrintOperator.from_defaults(lmax=256)
response_space = fingerprint.codomain

# Compose the fingerprint with the ocean average of its sea level component.
sea_level = response_space.subspace_projection(0)
average = ocean_average_operator(fingerprint.state, response_space.subspace(0))
forward = average @ sea_level @ fingerprint

# The mean sea level change due to a given load.
datum = forward(fingerprint.state.greenland_load(fraction=0.1))

# The sensitivity kernel for that datum, obtained from the adjoint.
kernel = forward.adjoint(np.array([1.0]))

Built on this are the observation models in pyslfp.linear_operators, each pairing a forward operator with the machinery needed to pose an inversion:

  • TideGaugeObservationModel, using the GLOSS station network.
  • AltimetryObservationModel and JointAltimetryObservationModel, for sea surface height over the oceans and over the ice sheets.
  • GraceObservationModel, mapping loads to spherical harmonic coefficients of the potential change, with WMBMethod providing the purely spectral Wahr, Molenaar and Bryan (1998) approximation for comparison.

Package layout

Module Contents
core.py EarthModelParameters and EarthModel: physical constants, the non-dimensionalisation scheme (built on planetmodel's Scales), and the spherical harmonic discretisation.
love_numbers/ LoveNumbers, the generalised load and tidal Love numbers with their file and Green's functions, and the solver that computes them from any planetmodel model on a radial spectral-element mesh.
state.py EarthState, a snapshot of ice thickness and sea level, providing the ocean function, surface integration, regional projections and ready-made loads.
physics.py SeaLevelEquation and LinearSeaLevelEquation: the iterative solvers for the linear, non-linear and generalised forms of the equation.
linear_operators/ The physics as linear operators on Hilbert spaces, plus spatial projection and averaging operators, load mappings, and the tide gauge, altimetry and GRACE observation models.
ice/ IceNG for the ICE-5G, ICE-6G and ICE-7G histories, and AnalyticalIceModel for smooth synthetic states useful in testing.
regions.py Regional masks and boundary plotting for the IMBIE Antarctic basins, Mouginot Greenland basins, IHO seas, HydroBASINS catchments, AR6 regions and Natural Earth oceans.
plot.py Plotting of pyshtools.SHGrid fields on Cartopy projections.
data/ Location and automatic retrieval of the external datasets.

Tutorials

The tutorials are scripts under tutorials/scripts, written in cells (# %%) so that they run from the command line or cell by cell in an editor:

Script Contents
01_first_fingerprint.py Everything at its default: the fingerprint of a West Antarctic melt.
02_physics.py The scales, the Earth model, a state from an analytic ice model, a load of one's own, the linear and non-linear solutions.
03_love_numbers.py The shipped table, computing Love numbers from PREM, the identities, the radial solutions, files, and the complex numbers of a viscoelastic body.
04_operators.py The fingerprint as an operator, composition, adjoints and sensitivity kernels, polar wander, Sobolev spaces and tide gauges.
05_inversion.py A Bayesian inversion of synthetic GLOSS tide gauge data for ice thickness change.

They read the real datasets, so the first run downloads them. Earlier versions of the first, second, fourth and fifth exist as notebooks, which can be run locally or in Google Colab.

Tutorial Colab
1 — A first sea level fingerprint Open In Colab
2 — A closer look at the physics Open In Colab
3 — Operators, composition and sensitivity kernels Open In Colab
4 — A Bayesian inversion of tide gauge data Open In Colab

Tests

poetry run pytest             # the fast suite, which is the default
poetry run pytest -m slow     # only the slow tests
poetry run pytest -m ""       # everything

The slow tests are the ones that read the real datasets, so the first run of them downloads several hundred megabytes.

Dependencies

pyslfp is built on numpy and scipy, with pyshtools for spherical harmonic transforms and grids, pygeoinf for the Hilbert space and inference machinery, planetmodel for the Earth models and radial meshes the Love numbers are computed on, matplotlib and Cartopy for plotting, and regionmask with cf-xarray for the regional masks.

The only optional dependency is pyqt6, under the interactive extra described above. Nothing in the library imports it; it exists so that matplotlib has a Qt backend to fall back on.

Citation

If you use pyslfp in published work, please cite:

  • Al-Attar, D., Syvret, F., Crawford, O., Mitrovica, J.X. and Lloyd, A.J., 2024. Reciprocity and sensitivity kernels for sea level fingerprints. Geophysical Journal International, 236(1), pp.362–378.

  • D.A. Heathcote, T.Holland, A.M. Mag, M.E. Tamisiea, S. Coulson, S. Dangendorf, A.J. Lloyd, A. Mashayek, J.X. Mitrovica, D. Al-Attar, 2026. A scalable Bayesian framework for modern sea-level inference. arXiv, 2608.22336, https://arxiv.org/abs/2608.22336.

The datasets that pyslfp downloads — the ice histories, load Love numbers, tide gauge network and regional definitions — are the work of others and are redistributed here only for convenience. If you use them, please cite their original sources, which are recorded on the Zenodo record.

License

BSD-3-Clause. See LICENSE.

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