Genomics and computational-biology statistical computing for Python
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PyStatsGenomic
Genomics and computational-biology statistical computing for Python.
Status: early / reserved (
0.0.1). This package reserves thepystatsgenomicname within the PyStatistics open-core ecosystem and will grow into a full genomics statistics library. The public API is forthcoming.
PyStatsGenomic is part of the open-core PyStatistics family:
| Package | Layer |
|---|---|
pystatistics |
Fundamental, general statistics |
pystatsbio |
Biotech / pharma statistics |
pystatsgenomic |
Genomics / computational-biology statistics |
Like its siblings, it builds on pystatistics for the general statistical layer
and adds methods specific to genomics.
Planned scope (candidates, not commitments)
- Hardy–Weinberg equilibrium test for a SNP, with allele/genotype frequencies.
- Genomics-aware helpers for high-dimensional differential-abundance summaries.
Installation
pip install pystatsgenomic
License
MIT © Hai-Shuo. Part of the SGCX open-core ecosystem.
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