pygdb

A clean-room Python reader for Geosoft's proprietary .gdb ("Geosoft Database") binary format and the sibling .grd grid format.

[!IMPORTANT] This project has no affiliation with, and is not endorsed, sponsored, or certified by, Geosoft Inc., Seequent, Bentley Systems, or any of their successors. "Geosoft" and "Oasis montaj" are trademarks of their respective owners. This is an independent, third-party implementation produced entirely by clean-room means — see Provenance for the full research trail.

It was built using only publicly available information: vendor-published open-source code and documentation, independent third-party format readers, one openly-specified independent successor format (.geoh5, read via the third-party geoh5py library), and byte-level analysis of real, publicly downloaded .gdb files. No Geosoft software of any kind (the geosoft/gxapi/gxpy compiled package, Oasis montaj, Geosoft Desktop, or the free Geosoft Viewer) was installed, imported, or executed at any point in producing it.

Reading only — writing or mutating .gdb/.grd files is out of scope.

Installation

pip install python-gdb

The distribution is named python-gdb on PyPI (pygdb was already registered there for an unrelated project), but the importable package is pygdb. On a platform/Python version this project publishes a prebuilt wheel for, that automatically includes the optional Rust accelerator (see below) -- nothing extra to install or configure. Elsewhere, pip falls back to building from source, which needs a Rust toolchain. numpy is the one required dependency (used to return correctly-shaped arrays -- see Quick start below); everything else is optional.

Quick start

from pygdb import GDB

db = GDB("example.gdb")

db.compression           # CompressionInfo(code=0, name='DB_COMP_NONE', ...)
db.coordinate_systems     # ['NAD83 / UTM zone 11N', 'WGS 84'] (best-effort, may be [])

db.line_names[:5]         # ['L1000', 'L1001', 'L1010', 'L1020', 'L1030']
db.channels_on_line("L1000")   # channels that actually have data on this line
db.read("L1000", "Easting")    # random access by (line name, channel name)
                                # -> ndarray, shape (n_rows,) for a scalar
                                #    channel, (n_rows, array_width) for a
                                #    VA/array channel (docs/spec.md section 5)

See the docs for the lower-level, slot-index-based functions GDB is built on.

db.to_xarray("L1000") exports one line to an xarray.Dataset (pip install python-gdb[xarray], an optional dependency) — see the docs for how VA/array channels and duplicate channel names come through.

Optional Rust-accelerated backend

The pure-Python code in pygdb/ is always the reference implementation and always fully correct and usable on its own — nothing here depends on Rust. This package is built with maturin so that an optional Rust extension (pygdb._native, source under rust/) rides along and is used automatically when present: it accelerates the two real CPU-bound hot paths profiling found in this reader — LZRW1 decompression and fixed-width string decoding — roughly 3-6x on real files, measured against this project's own sample corpus. pygdb/lzrw1.py/pygdb/gdb_reader.py detect it at import time and fall back to plain Python transparently if it isn't there.

Building it yourself (e.g. for local development, or a platform without a published wheel) needs a Rust toolchain:

pip install -e ".[dev]"   # compiles pygdb._native as part of the install

or, for a release-optimized build without an editable install:

pip install maturin
maturin build --release --manifest-path rust/Cargo.toml

See rust/src/lib.rs for what's implemented (and, just as importantly, what was tried and deliberately left out after being benchmarked as not worth it — a parallel batch decoder and a memory-mapped-file I/O path, both documented there with real numbers), and .github/workflows/wheels.yml for the released wheel matrix: an abi3 wheel per platform covering every non-free-threaded CPython ≥3.12, an abi3.abi3t wheel per platform (PEP 803) covering both the GIL-enabled and free-threaded builds of CPython ≥3.15 with a single wheel, and one version-specific wheel per platform for 3.14's free-threaded build (3.14t has no stable-ABI option — abi3t only exists from 3.15 onward).

Documentation

Full documentation — the format specification, usage, contributing guide, and research provenance — lives under docs/ and is built with Zensical. To view it locally:

pip install -e ".[docs]"
zensical serve

docs/spec.md — the living reference specification for the .gdb/.grd on-disk format, with a confidence rating (confirmed / likely / guess / unknown) on every field. Updated as more real example files are tested against it.
docs/contributing.md — how to report bugs (reproducible example files welcome) and this project's hard boundary on reverse engineering.
docs/provenance/ — the original research log and write-up this implementation was derived from.

Testing

pip install -e ".[dev]"
pytest

Most of the suite is synthetic-fixture unit tests (tests/test_*.py, minus test_integration_samples.py) that build minimal .gdb/.grd byte layouts by hand — no sample data required, safe to run anywhere including CI. tests/test_integration_samples.py additionally cross-checks the reader against real files in a local, gitignored samples/ directory when present, and skips (not fails) when it's absent.

Sample data

Real .gdb/.grd sample files used during development are not committed to this repository or otherwise redistributed — we don't necessarily have redistribution rights for them. See docs/provenance/notes.md for exact provenance (source URL/DOI/portal, size) for every sample used, so they can be re-downloaded independently.

License

Metadata

Release files for python-gdb 0.1.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for python-gdb 0.1.0
File	Size	Uploaded
python_gdb-0.1.0.tar.gz	50.5 kB	Sep 11, 2026	Details

Built distributions (wheels)

Table of built distributions (wheels) for python-gdb 0.1.0
File	Interpreter	ABI	Platform	Reset
python_gdb-0.1.0-cp315-abi3.abi3t-win_arm64.whl 140.4 kB Sep 11, 2026	CPython 3.15	abi3t, abi3	Windows ARM64	Details
python_gdb-0.1.0-cp315-abi3.abi3t-win_amd64.whl 142.2 kB Sep 11, 2026	CPython 3.15	abi3t, abi3	Windows x86-64	Details
python_gdb-0.1.0-cp315-abi3.abi3t-win32.whl 136.5 kB Sep 11, 2026	CPython 3.15	abi3t, abi3	Windows x86-32	Details
python_gdb-0.1.0-cp315-abi3.abi3t-musllinux_1_2_x86_64.whl 308.5 kB Sep 11, 2026	CPython 3.15	abi3t, abi3	Linux musl 1.2+ x86-64	Details
python_gdb-0.1.0-cp315-abi3.abi3t-musllinux_1_2_aarch64.whl 286.5 kB Sep 11, 2026	CPython 3.15	abi3t, abi3	Linux musl 1.2+ ARM64	Details
python_gdb-0.1.0-cp315-abi3.abi3t-manylinux_2_28_x86_64.whl 227.5 kB Sep 11, 2026	CPython 3.15	abi3, abi3t	Linux glibc 2.28+ x86-64	Details
python_gdb-0.1.0-cp315-abi3.abi3t-manylinux_2_28_i686.whl 242.5 kB Sep 11, 2026	CPython 3.15	abi3t, abi3	Linux glibc 2.28+ x86-32	Details
python_gdb-0.1.0-cp315-abi3.abi3t-manylinux_2_28_aarch64.whl 219.8 kB Sep 11, 2026	CPython 3.15	abi3t, abi3	Linux glibc 2.28+ ARM64	Details
python_gdb-0.1.0-cp315-abi3.abi3t-macosx_11_0_arm64.whl 210.2 kB Sep 11, 2026	CPython 3.15	abi3t, abi3	macOS 11.0+ ARM64	Details
python_gdb-0.1.0-cp315-abi3.abi3t-macosx_10_15_x86_64.whl 220.4 kB Sep 11, 2026	CPython 3.15	abi3, abi3t	macOS 10.15+ x86-64	Details
python_gdb-0.1.0-cp314-cp314t-win_arm64.whl 141.0 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	Windows ARM64	Details
python_gdb-0.1.0-cp314-cp314t-win_amd64.whl 142.6 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	Windows x86-64	Details
python_gdb-0.1.0-cp314-cp314t-win32.whl 137.2 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	Windows x86-32	Details
python_gdb-0.1.0-cp314-cp314t-musllinux_1_2_x86_64.whl 309.0 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	Linux musl 1.2+ x86-64	Details
python_gdb-0.1.0-cp314-cp314t-musllinux_1_2_aarch64.whl 287.2 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	Linux musl 1.2+ ARM64	Details
python_gdb-0.1.0-cp314-cp314t-manylinux_2_28_x86_64.whl 228.0 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	Linux glibc 2.28+ x86-64	Details
python_gdb-0.1.0-cp314-cp314t-manylinux_2_28_i686.whl 243.4 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	Linux glibc 2.28+ x86-32	Details
python_gdb-0.1.0-cp314-cp314t-manylinux_2_28_aarch64.whl 220.4 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	Linux glibc 2.28+ ARM64	Details
python_gdb-0.1.0-cp314-cp314t-macosx_11_0_arm64.whl 210.7 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	macOS 11.0+ ARM64	Details
python_gdb-0.1.0-cp314-cp314t-macosx_10_15_x86_64.whl 221.0 kB Sep 11, 2026	CPython 3.14	CPython 3.14 free-threading	macOS 10.15+ x86-64	Details
python_gdb-0.1.0-cp312-abi3-win_arm64.whl 140.7 kB Sep 11, 2026	CPython 3.12	abi3	Windows ARM64	Details
python_gdb-0.1.0-cp312-abi3-win_amd64.whl 142.5 kB Sep 11, 2026	CPython 3.12	abi3	Windows x86-64	Details
python_gdb-0.1.0-cp312-abi3-win32.whl 136.8 kB Sep 11, 2026	CPython 3.12	abi3	Windows x86-32	Details
python_gdb-0.1.0-cp312-abi3-musllinux_1_2_x86_64.whl 308.7 kB Sep 11, 2026	CPython 3.12	abi3	Linux musl 1.2+ x86-64	Details
python_gdb-0.1.0-cp312-abi3-musllinux_1_2_aarch64.whl 286.8 kB Sep 11, 2026	CPython 3.12	abi3	Linux musl 1.2+ ARM64	Details
python_gdb-0.1.0-cp312-abi3-manylinux_2_28_x86_64.whl 227.7 kB Sep 11, 2026	CPython 3.12	abi3	Linux glibc 2.28+ x86-64	Details
python_gdb-0.1.0-cp312-abi3-manylinux_2_28_i686.whl 243.0 kB Sep 11, 2026	CPython 3.12	abi3	Linux glibc 2.28+ x86-32	Details
python_gdb-0.1.0-cp312-abi3-manylinux_2_28_aarch64.whl 220.1 kB Sep 11, 2026	CPython 3.12	abi3	Linux glibc 2.28+ ARM64	Details
python_gdb-0.1.0-cp312-abi3-macosx_11_0_arm64.whl 210.5 kB Sep 11, 2026	CPython 3.12	abi3	macOS 11.0+ ARM64	Details
python_gdb-0.1.0-cp312-abi3-macosx_10_13_x86_64.whl 220.7 kB Sep 11, 2026	CPython 3.12	abi3	macOS 10.13+ x86-64	Details

Total release size: 6.5 MB

Release files / python_gdb-0.1.0.tar.gz

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Release files / python_gdb-0.1.0-cp315-abi3.abi3t-win_arm64.whl

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Release files / python_gdb-0.1.0-cp315-abi3.abi3t-win32.whl

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Size	136.5 kB
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Release files / python_gdb-0.1.0-cp315-abi3.abi3t-musllinux_1_2_x86_64.whl

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Size	308.5 kB
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Release files / python_gdb-0.1.0-cp315-abi3.abi3t-macosx_11_0_arm64.whl

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Release files / python_gdb-0.1.0-cp314-cp314t-win_arm64.whl

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Release files / python_gdb-0.1.0-cp312-abi3-win_arm64.whl

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Release history Release notifications | RSS feed

0.4.0

Sep 30, 2026 31 release files

0.3.0

Sep 27, 2026 31 release files

0.2.1

Sep 27, 2026 31 release files

0.2.0

Sep 14, 2026 31 release files

This release

0.1.0 This release

Sep 11, 2026 31 release files

python-gdb 0.1.0

pygdb

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Optional Rust-accelerated backend

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