Implementation of Transition Path Theory for stationary, periodically varying, and finite-time Markov chains.
Project description
PyTPT
Implementation of Transition Path Theory for:
- stationary Markov chains (pytpt/stationary.py),
- for periodically varying Markov chains (pytpt/periodic.py),
- for time-inhomogenous Markov chains over finite time intervals (pytpt/finite.py).
Based on: Helfmann, L., Ribera Borrell, E., Schuette, C., & Koltai, P. (2020). Extending Transition Path Theory: Periodically-Driven and Finite-Time Dynamics. arXiv preprint arXiv:2002.07474.
PyTPT Package Installation
Install the package using pip install pytpt.
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