pyTractoViz
Python tools for diffusion tractography visualization and QC reporting.
Installation
pip install pytractoviz
With uv:
uv tool install pytractoviz
Quick start
Interactive 3D review of tract files:
pytractoviz interactive /path/to/bundles --ref /path/to/T1w.nii.gz
Batch QC pipeline for a subject (PYAFQ + qsirecon layout):
export PYTRACTOVIZ_TRACTOGRAPHY_ROOT=/path/to/tractography
pytractoviz run sub-0000 UNC -j 4
Regenerate reports without re-running the pipeline:
pytractoviz html /path/to/qc_data.json
pytractoviz group-html /path/to/QC
pytractoviz group-interactive UNC=/path/to/QC
Documentation
Full usage guide, path configuration, and API reference:
1 maintainer
Metadata
1 maintainer
Release files for pytractoviz 0.6.7
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| pytractoviz-0.6.7.tar.gz | 159.1 kB | Without provenance | Details for pytractoviz-0.6.7.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| pytractoviz-0.6.7-py3-none-any.whl | Python 3 | none | any | Details for pytractoviz-0.6.7-py3-none-any.whl |
Total release size: 253.7 kB
Release files / pytractoviz-0.6.7.tar.gz
| Download URL | pytractoviz-0.6.7.tar.gz |
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| Size | 159.1 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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Release files / pytractoviz-0.6.7-py3-none-any.whl
| Download URL | pytractoviz-0.6.7-py3-none-any.whl |
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| Size | 94.5 kB |
| Tags | Python 3 |
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