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QALITA Platform Core lib for common function used in pack

Project description

QALITA Core

QALITA Core is a lightweight helper library used by QALITA packs to load data from multiple sources, materialize them to Parquet in deterministic chunks, and share common utilities (sanitization and aggregation helpers).

Key features

  • Unified data access via a simple DataSource abstraction and factory
  • File, database, and object storage loaders with streaming to Parquet
  • Deterministic, size-bounded Parquet chunking with stable filenames
  • Safe Parquet writing for pandas DataFrames (automatic sanitization)
  • Shared aggregators for completeness, outliers, duplicates, and timeliness
  • Minimal pack runtime with JSON config loading and simple asset persistence

Supported sources

  • Files: CSV (.csv), Excel (.xlsx), JSON, Parquet (pass-through)
  • Databases: PostgreSQL, MySQL, Oracle, MS SQL Server, SQLite
  • Object storage: Amazon S3, Google Cloud Storage, Azure Blob (via abfs), HDFS

Notes:

  • Folder, MongoDB classes exist as placeholders; MongoDB is not yet implemented.
  • SQLite is supported through the generic DatabaseSource when selected via type: "sqlite".

Installation

Prerequisites: Python 3.10–3.12 and uv.

Install dependencies and set your environment:

pip install uv
uv sync

Open a uv shell when developing:

uv shell

Quickstart

Use within a Pack

Pack loads four JSON files by default (overridable) and provides load_data() for source or target triggers.

from qalita_core.pack import Pack

pack = Pack(configs={
    "pack_conf": "./pack_conf.json",
    "source_conf": "./source_conf.json",
    "target_conf": "./target_conf.json",
    "agent_file": "~/.qalita/.worker",
})

# Ensure chunking/output are set (can be in pack_conf["job"] too)
pack.pack_config.setdefault("job", {})
pack.pack_config["job"]["parquet_output_dir"] = "./parquet"
pack.pack_config["job"]["chunk_rows"] = 100_000

# Load source
source_paths = pack.load_data("source")
# Load target (optional)
target_paths = pack.load_data("target")

# Persist custom metrics/recommendations/schemas to JSON files
pack.metrics.data.append({"key": "score", "value": "0.95", "scope": {"perimeter": "dataset", "value": "my_dataset"}})
pack.metrics.save()       # writes metrics.json
pack.recommendations.save()  # writes recommendations.json
pack.schemas.save()          # writes schemas.json

Parquet chunking and filenames

  • CSV/JSON/Excel are streamed with chunksize into multiple parquet files.
  • Databases are read with chunked SQL via SQLAlchemy/pandas.read_sql.
  • Filenames use a stable pattern: <source>_<object>_part_<k>.parquet where:
    • <source> is a slug of the source type (e.g. file, sqlite, postgresql).
    • <object> is a slug of the table name, query label, or file stem.
    • Example: file_testdata_part_1.parquet, sqlite_items_part_3.parquet, sqlite_query_part_2.parquet.

Configure output and size via pack_config:

  • parquet_output_dir (default: ./parquet)
  • chunk_rows (default: 100000)
  • Optional job.source.skiprows applied to CSV/Excel

Safe Parquet writing for pandas

On import, QALITA Core installs a small monkeypatch so DataFrame.to_parquet:

  • Ensures column names are strings
  • Decodes bytes to UTF‑8 strings when present
  • Normalizes mixed-type object columns and categoricals
  • Defaults to engine="pyarrow"

You can also call the sanitizer explicitly:

from qalita_core import sanitize_dataframe_for_parquet
clean_df = sanitize_dataframe_for_parquet(df)

Aggregation helpers (for packs)

Helpers centralize common result/metric aggregation logic:

from qalita_core import (
    detect_chunked_from_items,
    normalize_and_dedupe_recommendations,
    CompletenessAggregator,
    OutlierAggregator,
    DuplicateAggregator,
    TimelinessAggregator,
)
  • CompletenessAggregator: column/dataset completeness and schema extraction
  • OutlierAggregator: per-column and dataset outlier/normality metrics
  • DuplicateAggregator: duplicate counts and dataset-level score using key columns
  • TimelinessAggregator: dates/years coverage and recency scoring

Development

  • Tests: uv run pytest
  • Formatting: uv run black .
  • Linting: uv run flake8 and uv run pylint <module>
  • Editable install while debugging:
uv sync
uv pip install -e .

Documentation

Additional material can be found in the online documentation: https://doc.qalita.io/.

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