racpy
RNASeq Age Calculation in Python
Free software: MIT license
Documentation: https://racpy.readthedocs.io.
Features
This is the Python verion of our proposed multi-tissue transcriptional age calculator.
The RNAAgeCalc paper can be found here https://doi.org/10.1371/journal.pone.0237006.
The Python package can be found here https://pypi.org/project/racpy.
The Python package documentation can be found here https://racpy.readthedocs.io.
An interactive Shiny App can be found here https://xuren2120.shinyapps.io/RNAAgeCalcshiny/.
The Shiny App demo can be found here http://www.ams.sunysb.edu/~pfkuan/RNAAgeCalc/instructions.html.
The R version can be found here https://bioconductor.org/packages/release/bioc/html/RNAAgeCalc.html.
Credits
This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.
Dependencies scanned by PyUp.io
Citation
Ren, X., & Kuan, P. F. (2020). RNAAgeCalc: A multi-tissue transcriptional age calculator. PloS one, 15(8), e0237006.
History
0.1.6 (2020-09-20)
Added citation
0.1.5 (2020-06-24)
Replaced “DESeq” with “DESeq2” throughout the package
0.1.4 (2020-06-10)
Updated requirements_dev.txt
0.1.3 (2020-04-24)
Included extra credits in README
0.1.2 (2020-02-18)
Bug fixes.
0.1.0 (2020-02-09)
Package created. First release on PyPI.
1 maintainer
Release files for racpy 0.1.6
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| racpy-0.1.6.tar.gz | 21.8 kB | Details |
Release files / racpy-0.1.6.tar.gz
| Download URL | racpy-0.1.6.tar.gz |
|---|---|
| Size | 21.8 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
f735fccfee42a01984293a7eb7908fc8baa1399462a2b49fc8e41bd7d17b6ab0
|
|
BLAKE2b-256 checksum How to use checksums |
31386f37b9b842cd6ea6af78e5c104aefb8d90c458d9bf08da95b8cbc834e88e
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/47.1.1.post20200604 requests-toolbelt/0.9.1 tqdm/4.46.1 CPython/3.7.7
|
