A image processing pipeline to automatically crop and quantify tumor burdens (radiance) in mice treated with bioluminescent tumors.
Intutitive processing of quantitative radiance data and raw mouse images is supported through a user friendly GUI interface.
PDF tutorial for GUI is hosted on google drive: https://drive.google.com/file/d/1Q7HhJTXOGI4TXo2OvoolGBY3IscC_FG0/view?usp=sharing
To use this package:
- If anaconda is not installed, follow installation instructions here: https://docs.anaconda.com/anaconda/install/
- Start terminal, type in and enter:
conda activate
- Now install radianceQuantifier via PyPi by typing the following line in the terminal:
pip install radianceQuantifier
- In this anaconda environment, type:
python3 -m radianceQuantifier
to start the program
1 maintainer
Release files for radianceQuantifier 0.8.0
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Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| radiancequantifier-0.8.0.tar.gz | 327.1 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| radianceQuantifier-0.8.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 664.7 kB
Release files / radiancequantifier-0.8.0.tar.gz
| Download URL | radiancequantifier-0.8.0.tar.gz |
|---|---|
| Size | 327.1 kB |
| Tags | Source |
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Release files / radianceQuantifier-0.8.0-py3-none-any.whl
| Download URL | radianceQuantifier-0.8.0-py3-none-any.whl |
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| Size | 337.6 kB |
| Tags | Python 3 |
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