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Persistent memory MCP server for AI development workflows — hybrid search, knowledge graph, session lifecycle.

Project description

RAWThink

Your AI assistant forgets everything between sessions. RAWThink fixes that.

Persistent memory for Claude Code — hybrid search, knowledge graph, session lifecycle. Think of it as a second brain that grows with every conversation.

The Problem

Claude Code is stateless. Every session starts from zero. You explain the same context, re-establish the same decisions, re-discover the same insights. Yesterday's breakthrough is today's cold start.

RAWThink gives your AI a memory that persists, decays naturally, and revises itself when you change your mind. It's a 15-tool MCP server that turns Claude Code into a long-term thinking partner.

Quick Start

Prerequisites

  • Python 3.10+
  • Docker (for Qdrant vector database)
  • Ollama (for local embeddings)
  • Node.js (for the SessionStart hook)

Install & set up

pip install rawthink-mcp
rawthink-install              # creates vault, configures MCP, installs hook
docker run -d --name rawthink-qdrant -p 6333:6333 -v rawthink_qdrant:/qdrant/storage qdrant/qdrant
ollama pull bge-m3            # download embedding model

If you cloned the repo, you can use docker compose up -d instead.

Restart Claude Code. Done.

rawthink-install handles everything: vault directory, ~/.claude.json MCP config, SessionStart hook, and starter files (CLAUDE.md, THINKING_DIRECTIVES.md). Run rawthink-install --vault ~/my-vault to customize the vault location.

Manual setup (without rawthink-install)

Add to your ~/.claude.json:

{
  "mcpServers": {
    "rawthink": {
      "command": "rawthink-mcp",
      "env": {
        "RAWTHINK_VAULT": "/path/to/your/vault"
      }
    }
  }
}

Create vault structure:

mkdir -p vault/{sessions,qnotes,archive/raw,outputs}

Install from source instead of PyPI:

git clone https://github.com/ygtalp/rawthink-mcp.git
cd rawthink-mcp
pip install -e .

Your First Session

Your vault starts empty — that's the point. Open Claude Code and start talking:

You:   "We're building a REST API. Let's use PostgreSQL with connection pooling."
Claude: [responds with technical discussion]

You:   "/qnote we decided on PostgreSQL + pgBouncer for the API layer"
       → saved to your vault as a searchable quick note

You:   "/rtclose"
       → Session exported, entities extracted, handoff written

Next session, Claude loads the handoff automatically and picks up where you left off. After a few sessions, your vault looks like this:

> search_thoughts("how did we handle the database?")

1. [2025-03-15_002] API Architecture Decisions        score: 0.74
   Decided on PostgreSQL + pgBouncer for connection pooling.
   Key insight: pool_mode=transaction for serverless...

2. [2025-03-22_001] Performance Review                 score: 0.61
   Revisited DB strategy — added read replicas for
   reporting queries, write primary stays single-node...

> read_graph(summary=True)

Knowledge Graph: 42 entities, 38 relations

  decision (5)
  - postgres-connection-pooling (3 obs) act=0.97
  - api-versioning-strategy    (4 obs) act=0.85
  - auth-jwt-vs-session        (2 obs) act=0.72
  concept (8)
  - cqrs-pattern               (3 obs) act=0.91
  - event-sourcing             (5 obs) act=0.88
  ...

What It Does

Three-layer memory

  1. Hot cache (MEMORY.md) — loaded every session, essential context
  2. Knowledge graph (JSONL) — entities, relations, temporal observations with belief revision
  3. Semantic search (Qdrant) — hybrid dense + BM25 across all sessions and qnotes

Session lifecycle

Session start (handoff loads) → Think together → /rtclose →
JSONL export + entity extraction + handoff for next session

Key capabilities

  • Hybrid search: BGE-M3 dense embeddings + BM25 sparse vectors, fused with RRF
  • Belief revision: observations can be invalidated, superseded, and tracked over time
  • Activation decay: unused knowledge fades (~23-day half-life), accessed knowledge stays hot
  • Epistemic typing: mark entities as assertion, hypothesis, or speculation
  • Multi-terminal safe: parallel sessions don't overwrite each other's handoffs
  • Thinking directives: structured discipline for human-AI thinking partnerships
  • Ollama fallback: embedding cache for when Ollama is temporarily unavailable

Architecture

┌─────────────────────────────────────────────────┐
│                  Claude Code                    │
│              (MCP Client)                       │
└──────────────────┬──────────────────────────────┘
                   │ MCP (stdio)
┌──────────────────▼──────────────────────────────┐
│                rawthink                         │
│           (FastMCP Server)                      │
│                                                 │
│  ┌─────────────┐  ┌──────────┐  ┌────────────┐  │
│  │   Indexer   │  │  Graph   │  │  Chunker   │  │
│  │ (Qdrant +   │  │ (JSONL   │  │ (Markdown  │  │
│  │  Ollama)    │  │  KG)     │  │  splitter) │  │
│  └──────┬──────┘  └────┬─────┘  └────────────┘  │
│         │              │                        │
│  ┌──────▼──────┐  ┌────▼─────┐                  │
│  │   Qdrant    │  │ memory   │                  │
│  │  (Docker)   │  │ .jsonl   │                  │
│  └─────────────┘  └──────────┘                  │
└─────────────────────────────────────────────────┘
                   │
        ┌──────────▼──────────┐
        │       Vault         │
        │  sessions/ qnotes/  │
        │  archive/  outputs/ │
        └─────────────────────┘

MCP Tools

Search (5 tools)

Tool Description
search_thoughts Hybrid semantic + keyword search across vault
get_session Retrieve full session content by ID
get_related Quick related thoughts lookup (session-level)
store_thought Store a new thought as a qnote
reindex Re-index vault content into Qdrant

Knowledge Graph (10 tools)

Tool Description
search_nodes Search entities by name, type, and observations
create_entities Create/merge entities with epistemic typing
create_relations Create relations (controlled vocabulary)
add_observations Add temporal observations to entities
invalidate_observations Mark observations as invalidated (belief revision)
delete_entities Delete entities and their relations
delete_observations Remove specific observations
delete_relations Remove specific relations
read_graph Read full graph with pagination + summary mode
open_nodes Open specific entities with their relations

How It's Different

RAWThink is not a codebase analyzer or a simple key-value memory. It's a living knowledge system designed for thinking partnerships.

RAWThink Basic MCP Memory Codebase Analyzers
Search Hybrid (dense + BM25 + RRF) Key lookup Graph query
Knowledge Temporal KG with belief revision Flat key-value Static AST graph
Memory decay Activation decay (~23 days) None None
Session lifecycle Full (export, extract, handoff) None None
Epistemic tracking assertion/hypothesis/speculation None extracted/inferred/ambiguous
Designed for Thinking & decision memory Simple facts Code structure

Why JSONL?

Human-readable, git-diffable, zero dependency. At 120 entities the graph loads in <50ms. At 10K entities ~1.4s. The optimization path is clear: mtime cache for repeated reads, lazy writes for activation updates, SQLite migration at 50K+ entities.

Configuration

All settings via environment variables or rawthink_mcp/config.py:

Setting Env Var Default Description
Vault path RAWTHINK_VAULT ../vault Path to vault directory
Qdrant URL QDRANT_URL http://localhost:6333 Qdrant server URL
Qdrant path QDRANT_PATH Set for embedded Qdrant (no Docker)
Ollama URL OLLAMA_URL http://localhost:11434 Ollama server URL
Embedding model OLLAMA_MODEL bge-m3 Ollama embedding model
KG file MEMORY_FILE_PATH ../vault/memory.jsonl Knowledge graph file path
Turkish normalization RAWTHINK_TURKISH_NORMALIZATION false Set 1 or true to enable
Decay rate 0.03 Activation decay (~23-day half-life)

Session Lifecycle

RAWThink includes a session close command (/rtclose) that:

  1. Exports the current conversation to clean markdown + full transcript + HTML
  2. Extracts key entities and relations into the knowledge graph
  3. Writes a project-specific handoff file for the next session
  4. Updates MEMORY.md with essential context

A SessionStart hook (rawthink-handoff.js) runs when Claude Code starts and loads the most recent handoff + recent qnotes into context automatically.

Session lifecycle currently requires Claude Code. MCP-native session tools are planned for v0.2.

Customization

CLAUDE.md

Edit CLAUDE.md to customize the thinking companion's behavior:

  • Role and tone
  • Active modes (free-flow, socratic, debate, synthesis, deep-dive, technical, galaxy-brain)
  • Epistemic transparency format
  • Meta-commands

THINKING_DIRECTIVES.md

Structured discipline for the thinking partnership. Every rule was born from a violation — don't follow mechanically, understand why each exists. Customize to match your workflow.

Obsidian (optional)

Open your vault directory in Obsidian to browse sessions and qnotes visually. The vault uses standard markdown with YAML frontmatter — no plugins needed.

Entity Types

Default entity type is "concept". Common types: concept, decision, rule, insight, question, project.

Relation Types

Canonical types (non-standard accepted with warning): supports, contradicts, evolved_into, depends_on, exemplifies, part_of, caused_by, enables, supersedes, related_to

Roadmap

  • Interactive knowledge graph visualization
  • Wiki export (agent-browsable markdown per entity)
  • .rawthinkignore for vault indexing control
  • Graph traversal queries (unexpected connections, multi-hop)
  • SQLite backend for 50K+ entities
  • MCP-native session tools (no Claude Code dependency)
  • Configurable language normalization

Article

Read the full story: Your AI Doesn't Remember You (coming soon)

License

MIT — see LICENSE.

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