py-rcsb_workflow
Introduction
RCSB Python workflow entry points for data processing and ETL/ELT operations.
Installation
Download the library source software from the project repository:
git clone --recurse-submodules https://github.com/rcsb/py-rcsb_workflow.git
# or to make sure the submodules are updated --
git submodule update --recursive --init
git submodule update --recursive --remote
Optionally, run test suite (Python versions >= 3.9) using tox:
tox
Installation is via the program pip.
pip install rcsb.workflow --extra-index-url https://pypi.anaconda.org/OpenEye/simple
To run tests from the source tree, the package must be installed in editable mode (i.e. -e):
pip install -e . --extra-index-url https://pypi.anaconda.org/OpenEye/simple
# or using uv
uv pip install -e .
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