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rdpairs

This is a Python package for working with paired-end read data.

Overview

rdpairs is a Python package for working with paired-end read data. It provides a set of tools for working with paired-end reads, including:

Requirements

  1. Python 3.10+
  2. Python modules:
    • pandas
    • numpy
    • scipy
    • sklearn
    • matplotlib
    • seaborn
    • pysam
  3. minimap2
  4. samtools
  5. bedtools

Metadata

Release files for rdpairs 0.1.0

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Source distribution (sdist)

Source distribution for rdpairs 0.1.0
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rdpairs-0.1.0.tar.gz 3.2 kB Without provenance Details for rdpairs-0.1.0.tar.gz

Built distribution (wheel)

Table of built distributions (wheels) for rdpairs 0.1.0
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rdpairs-0.1.0-py3-none-any.whl Python 3 none any Details for rdpairs-0.1.0-py3-none-any.whl

Total release size: 10.2 kB

Release files / rdpairs-0.1.0.tar.gz

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Size 3.2 kB
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Release files / rdpairs-0.1.0-py3-none-any.whl

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Size 7.1 kB
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Security for rdpairs 0.1.0

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This release

0.1.0 This release

2 release files No provenance

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