read-roi
Read ROI files .zip or .roi generated with ImageJ. Code is largely inspired from : http://rsb.info.nih.gov/ij/developer/source/ij/io/RoiDecoder.java.html
Functions
from read_roi import read_roi_file
from read_roi import read_roi_zip
roi = read_roi_file(roi_file_path)
# or
rois = read_roi_zip(roi_zip_path)
Note
- Some format specifications are not implemented. See
RoiDecoder.javafor details. - Most of "normal" ROI files should work.
- Feel free to hack it and send me modifications.
Requirements
- Python 3.5 and above.
Install
pip install read-roi
Or you can use Anaconda and conda-forge :
conda config --add channels conda-forge
conda install read-roi
License
Under BSD license. See LICENSE.
Authors
- Hadrien Mary hadrien.mary@gmail.com
Release a new version
- Run tests:
pytest -v read_roi/. - Install rever:
conda install -y rever. - Run check:
rever check. - Bump and release new version:
rever VERSION_NUMBER.
1 maintainer
Metadata
1 maintainer
Release files for read-roi 1.6.0
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| read-roi-1.6.0.tar.gz | 7.4 kB | Without provenance | Details for read-roi-1.6.0.tar.gz |
Release files / read-roi-1.6.0.tar.gz
| Download URL | read-roi-1.6.0.tar.gz |
|---|---|
| Size | 7.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
70aa222f348c300eead6318dc4ae3a72548bcde0ff352cca3742b527fde7565c
|
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No |
| Uploaded via |
twine/3.1.1 pkginfo/1.5.0.1 requests/2.23.0 setuptools/46.4.0.post20200518 requests-toolbelt/0.9.1 tqdm/4.46.0 CPython/3.7.6
|
Security for read-roi 1.6.0
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