receptor-digger 0.5.6

Tools for de novo discovery of genomic germline IG and TR receptor sequences

Digger

A toolkit for the automatic annotation of V,D and J genes and associated features in IG receptor genomic loci.

For more details, please see the documentation.

Changes in v 0.5.6:

• compatibility update for receptor_utils 0.0.40
• allow find_alignments to be called without a -ref parameter

Changes in v 0.5.5:

• speed optimisation for dig_sequence
• allow find_alignments to be called without a -ref parameter

Changes in V 0.5.4:

• Minor fixes to handling of non-functional sequences

Changes in V 0.5.3:

• Fixes to annotation in reverse-sense: false positives were not being filtered correctly
• Introduction of dig_sequence: targeted annotation of an identified sequence

Changes in V 0.5.1:

• (internal only) - Refactored elements of the code to make it more modular and easier to maintain.