REGENS (REcombinatory Genome ENumeration of Subpopulations) is an open source Python package that simulates whole genomes from real genomic segments. REGENS recombines these segments in a way that simulates completely new individuals while simultaneously preserving the input genomes' linkage disequilibrium (LD) pattern with extremely high fedility. REGENS can also simulate mono-allelic and epistatic single nucleotide variant (SNV) effects on a continuous or binary phenotype without perturbing the simulated LD pattern.
please visit our github page for more information
1 maintainer
Metadata
1 maintainer
Release files for regens 0.2.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| regens-0.2.0.tar.gz | 22.9 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| regens-0.2.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 40.9 kB
Release files / regens-0.2.0.tar.gz
| Download URL | regens-0.2.0.tar.gz |
|---|---|
| Size | 22.9 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
c67b7b764f65709bae20316d914b0b18c53423732295fd1a337e619d7b0f8907
|
|
BLAKE2b-256 checksum How to use checksums |
d512ec7dadf36b31102a729779f123f17b16af1dd711e8d9d3adbd27db478529
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.6.1 requests/2.25.0 setuptools/47.1.0 requests-toolbelt/0.9.1 tqdm/4.53.0 CPython/3.7.9
|
Release files / regens-0.2.0-py3-none-any.whl
| Download URL | regens-0.2.0-py3-none-any.whl |
|---|---|
| Size | 17.9 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
36db814c2452bfb871c8001066357a62be4160615a14dc773935ff7b5ef67b66
|
|
BLAKE2b-256 checksum How to use checksums |
c1b14ec8c3a663ecc1d3fe9bae26289fdae1993b34069ae99e01066c0d839043
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/3.2.0 pkginfo/1.6.1 requests/2.25.0 setuptools/47.1.0 requests-toolbelt/0.9.1 tqdm/4.53.0 CPython/3.7.9
|
