a Python package to generate various modes of feature vectors for DNA sequences by incorporating user-defined physicochemical properties and sequence-order effects
Project description
repDNA
repDNA is a Python package to generate various modes of feature vectors for DNA sequences by incorporating user-defined physicochemical properties and sequence-order effects.
This repDNA package is open source software made available under GPL license. Please see the LICENSE file for further details.
Important links
Home-page: http://bioinformatics.hitsz.edu.cn/repDNA/
Official source code repo: https://github.com/liufule12/repDNA
Download releases: http://bioinformatics.hitsz.edu.cn/repDNA/download
Supplementary (manual and example): http://bioinformatics.hitsz.edu.cn/repDNA/supplementary
Issue tracker: https://github.com/liufule12/repDNA/issues
Citation: http://bioinformatics.hitsz.edu.cn/repDNA/citation
Python Requirements
The repDNA was tested to work under Python 2.7, 3.3 and 3.4 on Windows, Mac and Linux.
Installation
If the user had installed pip (A tool for installing and managing Python packages), just type:
pip install repDNA
Otherwise, download and unzip the repDNA package, go to the directory, and type:
python setup.py install
or
sudo python setup.py install
