ribdif 1.1.3

A program to analyse and correct for the usefulness of amplicon sequences

RibDif

RibDif evaluates the usefulness of a given amplicon at differentiating within a genus or species

Installation

Ribdif is most easily installed with pip inside a virtual environment. Make sure your pip version is up to date

conda

pip install git+https://github.com/Rob-murphys/ribdif.git

Next we need to install some dependencies:

conda install -c bioconda vsearch fasttree muscle barrnap -y

Running

ribdif/ribdif -g <some genus name>

Use -h for full options list.