A program to analyse and correct for the usefulness of amplicon sequences
Project description
RibDif
RibDif evaluates the usefulness of a given amplicon at differentiating within a genus or species
Installation
Ribdif is most easily installed with pip inside a virtual environment. Make sure your pip version is up to date
conda
pip install git+https://github.com/Rob-murphys/ribdif.git
Next we need to install some dependencies:
conda install -c bioconda vsearch fasttree muscle barrnap -y
Running
ribdif/ribdif -g <some genus name>
Use -h for full options list.
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