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A tool for generating plots from existing RMSF data files.

Project description

RMSFPLOT A plotting tool that generates plots from existing RMSF analysis data files.

Installation Run this command in a terminal: python3 -m pip install rmsfplot

Commands included: px_rmsf_analysis(a, b, c, d, e) -This function uses plotly.express to generate a plot from existing RMSF analysis data files (format .dat or .csv)

-Parameter a: -Enter 'files' if your data is held within multiple files in one directory. Run this command within the directory that the files reside. -Enter 'folders' if your data is held within multiple files in multiple subdirectories. Run this command within the parent directory that holds all subdirectories.

-Parameter b: -Enter 'True' if you would like an average line of the RMSF results to be displayed -Enter 'False' if you would not like an average line to be displayed

-Parameter c: -Enter a string for the x axis label. -Enter 0 for the default option, which is 'Residue number'

-Parameter d: -Enter a string for the y axis label. -Enter 0 for the default option, which is 'Atomic flux'

-Parameter e: -Enter a string for the title of the plot -Enter 0 for the default option, which is 'RMSF plot'

plot_rmsf_analysis(a, b, c, d, e) -This function takes the same parameters as px_rmsf_analysis, but instead of generating a plot using plotly.express, matplotlib will be used to create a plot.

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