RNA Contamination Detector
rna_cd is a python package and command line tool designed to detect RNA contamination of DNA-seq experiments.
For our complete documentation, please checkout our readthedocs page.
Requirements
Python 3.5+
click
scikit-learn
pysam
matplotlib
Installation
PyPI
$ pip install rna-cd
Conda
- ::
$ conda install -c bioconda rna-cd
License
AGPLv3+
2 maintainers
Metadata
2 maintainers
Release files for rna-cd 0.2.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| rna_cd-0.2.0.tar.gz | 20.6 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| rna_cd-0.2.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 44.2 kB
Release files / rna_cd-0.2.0.tar.gz
| Download URL | rna_cd-0.2.0.tar.gz |
|---|---|
| Size | 20.6 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
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BLAKE2b-256 checksum How to use checksums |
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twine/1.13.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/3.6.7
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Release files / rna_cd-0.2.0-py3-none-any.whl
| Download URL | rna_cd-0.2.0-py3-none-any.whl |
|---|---|
| Size | 23.6 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
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Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/1.13.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/3.6.7
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