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rsmol (Python)

Headless, scriptable rsmol with a PyMOL-style cmd API. Everything runs on the same engine as the rsmol desktop app; cmd.save("x.rsmol") produces a session the app opens as is.

from rsmol import cmd

cmd.fetch("1hsg")
cmd.select("pocket", "byres (organic around 5) and polymer")
cmd.show("sticks", "pocket and not name N+C+O")
cmd.color("byelement", "pocket")
d = cmd.distance("h1", "1hsg and chain A and resi 25 and name OD1", "resn MK1 and name O2")
cmd.zoom("organic")
cmd.png("pocket.png", 1600, 1000)
cmd.save("pocket.rsmol")

Build from source with maturin develop --release inside a virtual environment.

Metadata

Release files for rsmol 0.2.1

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Source distribution for rsmol 0.2.1
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rsmol-0.2.1.tar.gz 148.6 kB With provenance Details

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Table of built distributions (wheels) for rsmol 0.2.1
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rsmol-0.2.1-cp310-abi3-win_amd64.whl CPython 3.10 abi3 Windows x86-64 Details
rsmol-0.2.1-cp310-abi3-manylinux_2_28_aarch64.whl CPython 3.10 abi3 Linux glibc 2.28+ ARM64 Details
rsmol-0.2.1-cp310-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl CPython 3.10 abi3 Linux glibc 2.17+ x86-64 Details
rsmol-0.2.1-cp310-abi3-macosx_11_0_arm64.whl CPython 3.10 abi3 macOS 11.0+ ARM64 Details
rsmol-0.2.1-cp310-abi3-macosx_10_12_x86_64.whl CPython 3.10 abi3 macOS 10.12+ x86-64 Details

Total release size: 24.0 MB

Release files / rsmol-0.2.1.tar.gz

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Size 148.6 kB
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