Skip to main content

Safe-SequencingSystem (SafeSeqs) data processing pipeline

Project description

SafeSeqS - Safe Sequencing System

Python package for processing of SafeSeqS data (https://www.ncbi.nlm.nih.gov/pubmed/21586637). The pipeline analyzes multiple samples in fastq sequencing files to identify mutations present in a small fraction of DNA templates.

Documentation

Please see the documentation on github for complete usage details.

Installation

Use pip to install the SafeSeqS package:

$ pip install safeseqs

SafeSeqS depends on several other packages and these will be installed automatically by pip if they are not already installed.

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Files for safeseqs, version 0.91
Filename, size File type Python version Upload date Hashes
Filename, size safeseqs-0.91.tar.gz (206.8 kB) File type Source Python version None Upload date Hashes View

Supported by

Pingdom Pingdom Monitoring Google Google Object Storage and Download Analytics Sentry Sentry Error logging AWS AWS Cloud computing DataDog DataDog Monitoring Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page