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Scale-free DF velocity moments and VP calculations with a Fortran backend.

Project description

scalefree

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Scale-free dynamical models (Fortran backend) with a small Python interface for computing intrinsic/projected velocity moments and (optionally) reconstructed velocity profiles (VPs) and Gauss–Hermite summaries.

The guiding principles are:

  • Keep the user-facing API small and predictable
  • Delegate heavy computation to a compiled backend
  • Provide structured, parseable outputs for reproducible workflows

This code was developped in the context of the HSTPROMO collaboration.


What this package provides

vprofile(...)

Runs the ScaleFree Fortran backend and returns intrinsic/projected velocity moments and (optionally) VP / Gauss–Hermite summaries.

Typical uses:

  • Line-of-sight (LOS) kinematics
  • Proper-motion (plane-of-sky) kinematics (POSr, POSt)
  • VP reconstruction from moments (when enabled)

hermite(...)

Utilities to fit Gauss–Hermite coefficients to a velocity-profile file and to evaluate analytic Gauss–Hermite profiles.

mock(...)

A convenience routine for generating synthetic 6D samples (x, y, z, vx, vy, vz) from a chosen model configuration (internally uses vprofile() to obtain GH parameters across angular bins).


Installation

From source (recommended for development)

poetry install

With pip

pip install scalefree --upgrade

Fortran requirement

vprofile() uses a Fortran executable. If you do not provide a precompiled binary, a local build requires gfortran.

Install gfortran:

  • Debian/Ubuntu: sudo apt-get install gfortran
  • Fedora: sudo dnf install gcc-gfortran
  • macOS (Homebrew): brew install gcc

Quickstart

1) Run vprofile()

from scalefree import vprofile

# Minimal projected (point) run + VP/Gauss–Hermite reconstruction
res = vprofile(
    potential="log",   # "log"/"logarithmic" or "kepler" (or 2 / 1)
    gamma=2.0,
    q=0.8,
    df=1,
    beta=0.0,
    s=0.0,
    t=0.0,
    inclination=60.0,  # degrees
    xi=0.0,            # degrees on projected plane (0 = major axis)
    theta=0.0,         # degrees (used only for intrinsic runs; safe to keep)
    usevp=True,        # set False if you only want moments
)

# Projected velocity moments (iproj: 1=LOS, 2=POSr, 3=POSt)
proj_los = res.blocks["projected_point"]["by_iproj"][1]
mu = proj_los["v1"]
sigma = (proj_los["v2"] - mu**2) ** 0.5
print(f"LOS: mean={mu:.6g}, sigma={sigma:.6g}")

# Optional: VP / Gauss–Hermite summary (only present when usevp=True)
vp_los = res.blocks["vp"]["by_iproj"][1]
print(f"LOS GH: h3={vp_los['h3']:.6g}, h4={vp_los['h4']:.6g}")

2) Fit Gauss–Hermite moments from a VP file

from pathlib import Path
import tempfile
import numpy as np

from scalefree import vprofile, hermite

res = vprofile(
    potential="log",
    gamma=2.0,
    q=0.8,
    beta=0.0,
    s=0.0,
    t=0.0,
    inclination=60.0,
    xi=0.0,
    theta=0.0,
    usevp=True,
)

iproj = 1  # 1=LOS, 2=POSr, 3=POSt
vp_data = res.blocks["vp_table"][iproj]["data"]  # (N,2): [v, vp]

# Write to a writable temp location
vp_path = Path(tempfile.gettempdir()) / "my_vp.dat"
np.savetxt(vp_path, vp_data, header="v vp")

gauss_info, gaussh_info, h_moments = hermite.hermite(vp_path)
print(gaussh_info)
print(h_moments["h3"], h_moments["h4"])

3) Generate a simple mock (currently deprecated)

from scalefree import mock

X = mock(
    potential=lambda: 1,
    gamma=4.0,
    q=0.9,
    beta=0.0,
    inclination=90.0,
    nsamples=10_000,
    nbins=180,
    usevp=True,
)

print(X.shape)  # (N, 6): (x, y, z, vx, vy, vz)

Documentation

To keep this README short, more detailed guides are intended to live under docs/:

  • docs/vmoments.md
  • Theory notes:
    • docs/theory/rotation.md
    • docs/theory/vp-shapes.md
    • docs/theory/pos-velocity.md

References and citation guidance

If you use this code in research, please cite the foundational scale-free modelling reference and any additional methodological references relevant to your workflow.

Core scale-free models (foundational)

  • de Bruijne, van der Marel & de Zeeuw (1996), MNRAS, 282, 909–925. arXiv: astro-ph/9601044

Plane of sight moments equations

  • Vitral et al. (2024), ApJ, 970, 1. DOI: 10.3847/1538-4357/ad571c. aeXiv: astro-ph/2407.07769

BibTeX (copy/paste)

@ARTICLE{1996MNRAS.282..909D,
  author  = {de Bruijne, Jos H. J. and van der Marel, Roeland P. and de Zeeuw, P. Tim},
  title   = {Scale-free dynamical models for galaxies: flattened densities in spherical potentials},
  journal = {Monthly Notices of the Royal Astronomical Society},
  year    = {1996},
  volume  = {282},
  number  = {3},
  pages   = {909--925},
  doi     = {10.1093/mnras/282.3.909},
  eprint  = {astro-ph/9601044},
  archivePrefix = {arXiv}
}

@ARTICLE{2024ApJ...970....1V,
       author = {{Vitral}, Eduardo and {van der Marel}, Roeland P. and {Sohn}, Sangmo Tony and {Libralato}, Mattia and {del Pino}, Andr{\'e}s and {Watkins}, Laura L. and {Bellini}, Andrea and {Walker}, Matthew G. and {Besla}, Gurtina and {Pawlowski}, Marcel S. and {Mamon}, Gary A.},
        title = "{HSTPROMO Internal Proper-motion Kinematics of Dwarf Spheroidal Galaxies. I. Velocity Anisotropy and Dark Matter Cusp Slope of Draco}",
      journal = {\apj},
     keywords = {Dark matter, Dwarf spheroidal galaxies, Astronomy data analysis, Proper motions, Stellar kinematics, Stellar dynamics, Galaxy dynamics, Galaxy structure, 353, 420, 1858, 1295, 1608, 1596, 591, 622, Astrophysics - Astrophysics of Galaxies, Astrophysics - Cosmology and Nongalactic Astrophysics},
         year = 2024,
        month = jul,
       volume = {970},
        pages = {1},
          doi = {10.3847/1538-4357/ad571c},
       eprint = {2407.07769},
}

Authors:

  • Roeland P. van der Marel,

    1994-1995 :
      development of code
    address : Space Telescope Science Institute
    Research Programs Office (RPO)
    3700 San Martin Drive
    Baltimore, MD 21218
    Tel : (+1) 410 338 4931
    Fax : (+1) 410 338 4596
    e-mail : marel@stsci.edu
    homepage : https://www.stsci.edu/~marel/

  • Jos H. J. de Bruijne,

    1994-1995 :
      testing and application of code
    address : Sterrewacht Leiden
    Postbus 9513
    2300 RA Leiden
    The Netherlands
    Tel : (+31) 71 5275878
    Fax : (+31) 71 5275819
    e-mail : debruyne@strw.LeidenUniv.nl
    homepage : http://www.strw.leidenuniv.nl/~debruyne/

  • Eduardo Vitral,

    2023-present :
      development of the Python interface
      implementation of plane-of-sky routines
      testing and application of code
    address : Royal Observatory of Edinburgh
    Edinburgh, UK
    e-mail : eduardo.vitral@roe.ac.uk
    homepage : https://eduardo-vitral.github.io

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