Scanorma for CytoTRACE (ScanoramaCT)
scanoramaCT.py is an adapted version of the original Scanorama code for application to CytoTRACE. The code has been modified to adjust the aligned gene count vectors using Gaussian kernel normalization. CytoTRACE is then applied to the Scanorama-adjusted gene counts and expression matrix.
scanoramaCT is now available within the CytoTRACE codebase and web framework (CytoTRACE GitHub).
1 maintainer
Release files for scanoramaCT 1.2.0
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | |
|---|---|---|---|
| scanoramaCT-1.2.0.tar.gz | 12.3 kB | Details |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| scanoramaCT-1.2.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 25.4 kB
Release files / scanoramaCT-1.2.0.tar.gz
| Download URL | scanoramaCT-1.2.0.tar.gz |
|---|---|
| Size | 12.3 kB |
| Tags | Source |
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Release files / scanoramaCT-1.2.0-py3-none-any.whl
| Download URL | scanoramaCT-1.2.0-py3-none-any.whl |
|---|---|
| Size | 13.1 kB |
| Tags | Python 3 |
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