scanpex 0.1.0

ScanPy Extension and kwarg Preferences

ScanpEx

• ScanPy Extension and kwarg Preferences
• Most codes were initially employed in "Design-of-Experiments for Nonlinear, Multivariate Biology: Rethinking Experimental Design through Perturb-seq"
• Related repositories:
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Documentation

Visit https://scanpex.readthedocs.io/en/latest/

Installation

pip install git+https://github.com/yo-aka-gene/ScanpEx.git

Citation

@article{okano2025design,
  title={Design-of-Experiments for Nonlinear, Multivariate Biology: Rethinking Experimental Design through Perturb-seq},
  author={Okano, Yuji and Ishikawa, Tetsuo and Sato, Yasunori and Okano, Hideyuki and Sakurada, Kazuhiro},
  journal={bioRxiv},
  pages={2025--12},
  year={2025},
  publisher={Cold Spring Harbor Laboratory}
}