Map single-cell transcriptomes to copy number evolutionary trees.
Project description
Map single-cell transcriptomes to copy number evolutionary trees. Check out the tutorial for more information.
Installation
$ pip install scatrex
SCATrEx uses JAX to perform automatic differentiation. By default, SCATrEx installs the CPU-only version of JAX, but we strongly recommend the use of GPU acceleration. Please follow the instructions in https://github.com/google/jax#pip-installation-gpu-cuda to install the GPU version of JAX.
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