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Autodock scipion plugin

Documentation under development, sorry for the inconvenience

Scipion framework plugin for the use of tools provided by Autodock software suite.

Full documentation to this plugin can be found in the official documentation page.

Install this plugin

You will need to use 3.0.0 version of Scipion to run these protocols. To install the plugin, you have two options:

  • Stable version

scipion installp -p scipion-chem-autodock

OR

  • through the plugin manager GUI by launching Scipion and following Configuration >> Plugins

  • Developer’s version

  1. Download repository:

git clone https://github.com/scipion-chem/scipion-chem-autodock.git
  1. Switch to the desired branch (master or devel):

Scipion-chem-autodock is constantly under development. If you want a relatively older an more stable version, use master branch (default). If you want the latest changes and developments, user devel branch.

cd scipion-chem-autodock
git checkout devel
  1. Install:

scipion installp -p path_to_scipion-chem-autodock --devel
  • Binary files

Atom_struct_utils plugin is a pure Python module, no binary files are required.

  • Tests

To check the installation, simply run the following Scipion test:

Buildbot status

Status devel version:

http://scipion-test.cnb.csic.es:9980/badges/bioinformatics_dev.svg

Status production version:

http://scipion-test.cnb.csic.es:9980/badges/bioinformatics_prod.svg

Metadata

Release files for scipion-chem-autodock 1.1.1

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for scipion-chem-autodock 1.1.1
File Size Uploaded Provenance Actions
scipion_chem_autodock-1.1.1.tar.gz 107.2 kB Without provenance Details for scipion_chem_autodock-1.1.1.tar.gz

Built distribution (wheel)

Table of built distributions (wheels) for scipion-chem-autodock 1.1.1
File Interpreter ABI Platform Actions
scipion_chem_autodock-1.1.1-py3-none-any.whl Python 3 none any Details for scipion_chem_autodock-1.1.1-py3-none-any.whl

Total release size: 243.4 kB

Release files / scipion_chem_autodock-1.1.1.tar.gz

Download URL scipion_chem_autodock-1.1.1.tar.gz
Size 107.2 kB
Tags Source
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e13f588433c02cb236a4becf8f933d7789fe8414172a40d61157f944d082a40c
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Uploaded via twine/7.0.0 CPython/3.10.22

Release files / scipion_chem_autodock-1.1.1-py3-none-any.whl

Download URL scipion_chem_autodock-1.1.1-py3-none-any.whl
Size 136.2 kB
Tags Python 3
SHA-256 checksum
How to use checksums
e5dfc7ca34a7e6b062dd5801a70ff236dcb5587cb60f592ae1305b3ba312045f
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1122edf5ee31f1a4194c53330be70b16bba0e1553b0cf33f6edb6e34a1333242
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No
Uploaded via twine/7.0.0 CPython/3.10.22

Security for scipion-chem-autodock 1.1.1

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None of the files in this release were uploaded with provenance metadata.

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