scipion-pyworkflow-windows

pyworkflow

pyworkflow is a simple workflow platform used in scientific applications. It has been initially developed within the Scipion framework for image processing in Electron Microscopy.

pyworkflow allows you to define a working Domain by defining the following group of classes:

Objects: input/outputs that will be generated by different programs

Protocols: special type of Objects that have defined input parameters and will produce some output

Viewers: Entities that provide graphical analysis of results.

Wizards: Small GUIs that can be develop to help users to select given parameter values.

Development

To install pyworkflow for development purposes, one can do:

# Create a clean virtual environment
conda create -n scipion python=3.8
conda activate
git clone https://github.com/scipion-em/scipion-pyworkflow.git
cd scipion-pyworkflow
pip install -e .

Running tests

conda activate scipion
cd scipion-pyworkflow
export SCIPION_DOMAIN="pyworkflowtests/tests/mock_domain"
python -m unittest discover

# Simple project GUI can be shown after running tests:
python pyworkflow/apps/pw_project.py TestProtocolOutputs

All test projects are located in ~/ScipionUserData/Tests/

API documentation

https://scipion-em.github.io/docs/release-3.0.0/api/pyworkflow/pyworkflow.html

Metadata

Release files for scipion-pyworkflow-windows 0.1.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for scipion-pyworkflow-windows 0.1.0
File	Size	Uploaded
scipion_pyworkflow_windows-0.1.0.tar.gz	1.0 MB	Nov 26, 2024	Details

Built distribution (wheel)

Table of built distributions (wheels) for scipion-pyworkflow-windows 0.1.0
File	Interpreter	ABI	Platform	Reset
scipion_pyworkflow_windows-0.1.0-py3-none-any.whl 1.1 MB Nov 26, 2024	Python 3	none	any	Details

Total release size: 2.1 MB

Release files / scipion_pyworkflow_windows-0.1.0.tar.gz

Download URL	scipion_pyworkflow_windows-0.1.0.tar.gz
Size	1.0 MB
Tags	Source
SHA-256 checksum How to use checksums	`202e1f97f77e50e2a27c7e41fe1f7fca6f20736a486d595d36848643236d772d`
BLAKE2b-256 checksum How to use checksums	`0ab3461656e4171d776aa87805d3dbed90a88940ef4af377e75158b1d042aab3`
Upload date	Nov 26, 2024
Uploaded using Trusted Publishing? What is trusted publishing?	Yes
Uploaded via	`uv/0.5.4`

Release files / scipion_pyworkflow_windows-0.1.0-py3-none-any.whl

Download URL	scipion_pyworkflow_windows-0.1.0-py3-none-any.whl
Size	1.1 MB
Tags	Python 3
SHA-256 checksum How to use checksums	`c12815c693a2d0dd87fd03feb30dedc22de336ae04efe3a9aa029fc9c0d41c01`
BLAKE2b-256 checksum How to use checksums	`bda7da0dbecf4f033202b42cdd938b31182752bbb1efece609ca0021a14de392`
Upload date	Nov 26, 2024
Uploaded using Trusted Publishing? What is trusted publishing?	Yes
Uploaded via	`uv/0.5.4`