scot 0.1.0

EEG/MEG Source Connectivity Toolbox

SCoT is a Python package for EEG/MEG source connectivity estimation.

Obtaining SCoT

Use the following command to fetch the sources:

git clone –recursive https://github.com/scot-dev/scot.git scot

The flag –recursive tells git to check out the numpydoc submodule, which is required for building the documentation.

Documentation

Documentation is available online at http://scot-dev.github.io/scot-doc/index.html.

Dependencies

Required: numpy, scipy

Optional: matplotlib, scikit-learn

Examples

To run the examples on Linux, invoke the following commands inside the SCoT main directory:

PYTHONPATH=. python examples/misc/connectivity.py

PYTHONPATH=. python examples/misc/timefrequency.py

etc.

Note that you need to obtain the example data from https://github.com/SCoT-dev/scot-data. The scot-data package must be on Python’s search path.