A python package for visualizing the SingleCell data.
Project description
scplotlib
scplotlib is a python plotting library for the SingleCell (https://github.com/edwinv87/singlecell) object. It is built using Altair (https://altair-viz.github.io/). It can generate various plots for data stored in a SingleCell object such as:
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Core plots - line plots, bar plots, scatter plots
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Visualizing high dimensional data - t-SNE plots, PCA plots
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Specialized plots - heatmaps, silhouette plots, outlier score plots
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