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A python package for visualizing the SingleCell data.

Project description

scplotlib

scplotlib is a python plotting library for the SingleCell object. It is built using Altair. It can generate various plots for data stored in a SingleCell object such as:

  1. Core plots - line plots, bar plots, scatter plots

  2. Visualizing high dimensional data - t-SNE plots, PCA plots

  3. Specialized plots - heatmaps, silhouette plots, outlier score plots

Installation

To install scplotlib, run the following command

pip install scplotlib

Documentation

Check the project homepage for documentation.

Contact

Contact the author on vans.edw@gmail.com to give feedback/suggestions for further improvements and to report issues.

Project details


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scplotlib-1.0.2.tar.gz (4.9 kB view hashes)

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scplotlib-1.0.2-py3-none-any.whl (8.6 kB view hashes)

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