scyseq: Symbolic Sequences Processing in Python
scyseq is a Python package for generating, defining, manipulating, characterizing and
plotting symbolic sequences which are defined as successive occurrences of
symbols (or states) taken from a finite-length alphabet (set of states).
Overview
scyseq provides:
- adapted objects: symbols, alphabet and sequence
- functions for symbolic sequence manipulations: rename, recode, etc.
- visualisations functions
- functions for symbolic sequences analysis from simple countings to information theory or Markov processes.
Its documentation is available at: scyseq-tools.github.io/scyseq.
Another Python package dealing with symbolic sequences with a complementary point of view is: slearn
Installation
scyseq is available on pypi
pypi.org/project/scyseq
so:
pip install scyseq
should do the job...
Dependencies:
- numpy
- scipy, and
- matplotlib
Tools used in this package:
License
This project is licensed under the BSD 3-Clause
Contributing
Contributions to scyseq are welcome!
To contribute:
- Fork the repository: github.com/scyseq-tools/scyseq
- Create a branch for your feature or bug fix.
- Submit a pull request with a clear description of changes.
- Ensure tests pass.
See also: code of conduct
1 maintainer
Metadata
1 maintainer
Release files for scyseq 0.1.0
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| File | Size | Uploaded | |
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| scyseq-0.1.0.tar.gz | 398.8 kB | Details |
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| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| scyseq-0.1.0-py3-none-any.whl | Python 3 | none | any | Details |
Total release size: 430.8 kB
Release files / scyseq-0.1.0.tar.gz
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