COVID-19 mathematical modeling

This repository is aimed to contain the programs used for dynamical modeling of COVID-19 spread with SEIQRDP compartmental model. It is described in this paper by Mohamed Taha Rouabah, Abdellah Tounsi, and Nacer Eddine Belaloui.

This repository will also contain an agent-based program for epidemic spread simulation in the near future.

seiqrdp_model

This package includes computational tools to fit data, simulate and calibrate parameters of the compartmental epidemiological SEIQRDP model using a genetic fitting algorithm and parallel computing techniques.

Architecture

How to install

Using pip (preferred way)

Execute the following line in your command-line interface:

pip install seiqrdp-model

Using setup.py

Download the repository then execute the following line in your command-line interface:

python setup.py install

You need to cd inside the repository folder.

Quick start

The module is fully documented and equiped with all necessary information about the classes and methods. Moreover, you are welcome to check launcher.py file which shows an example of how to use this module.

Data

• World wide data is sourced and maintained by the John Hopkins University Center for Systems Science and Engineering
• Data for Algeria is provided by Algerian Health Ministry and CDTA

License

This work is licensed under the Apache 2.0 License