SeqPlot
=======
Plot overview of Multiple Sequence Alignments (MSA) using colored boxes
######################################
# seqPlot.py
######################################
usage:
seqPlot.py -f multifasta alignment
options:
-f, --fasta=FILE multifasta alignment (eg. "align.fas")
[ -o, --outfile=STR output file (png) ]
[ -c, --colorscheme=STR STR in ("default", "clustal", "lesk",
"cinema", "maeditor", "dna",
"aacid") ]
[ -x, --boxwidth=INT draw INT pixels per residue (x direction) ]
[ -y, --boxheight=INT draw INT pixels per residue (y direction) ]
adding identifiers:
[ -s, --show_names also draw sequence ids ]
[ -F, --font_file=FONT path to truetype font (monospace fonts recommended) ]
=======
Plot overview of Multiple Sequence Alignments (MSA) using colored boxes
######################################
# seqPlot.py
######################################
usage:
seqPlot.py -f multifasta alignment
options:
-f, --fasta=FILE multifasta alignment (eg. "align.fas")
[ -o, --outfile=STR output file (png) ]
[ -c, --colorscheme=STR STR in ("default", "clustal", "lesk",
"cinema", "maeditor", "dna",
"aacid") ]
[ -x, --boxwidth=INT draw INT pixels per residue (x direction) ]
[ -y, --boxheight=INT draw INT pixels per residue (y direction) ]
adding identifiers:
[ -s, --show_names also draw sequence ids ]
[ -F, --font_file=FONT path to truetype font (monospace fonts recommended) ]
1 maintainer
Metadata
1 maintainer
Release files for seqPlot 0.1.0
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Built distribution (wheel)
| File | Interpreter | ABI | Platform | Reset |
|---|---|---|---|---|
| seqPlot-0.1.0-py2.7.egg | Legacy Egg format | - | - | Details |
Release files / seqPlot-0.1.0-py2.7.egg
| Download URL | seqPlot-0.1.0-py2.7.egg |
|---|---|
| Size | 316.6 kB |
| Tags | Egg |
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