Biomolecular multi-instance machine learning
Project description
SEQmil is a Python package for applying Multi-Instance Learning (MIL) to biological sequences such as RNA, DNA, and proteins. It enables flexible representation of sequences as bags of subsequences, and supports learning tasks where only bag-level labels are available.
Key Features
🧬 MIL support for biological sequences (RNA, DNA, Proteins)
🧩 Instance construction using sliding windows
🛠️ Compatible with scikit-learn, PyTorch, and standard ML tools
📊 Integrated tutorial and example workflow
Installation
pip install seqmilQuick start
See the examples of SEQmil application for different tasks in the tutorial collection .
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