This is a pre-production deployment of Warehouse, however changes made here WILL affect the production instance of PyPI.
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Project Description

Installation

You can install shogen2 by running:

$ pip install shogen2

Usage

Typical usage is:

$ shogen2.py [options] genomefile metabolismfile.sbml catalysationfile queries

Options:
  -h, --help   show this help message and exit
  -k K, --k=K  Number of ranked  shortest genome segments (Default to 5)
  -l L, --l=L  maximum length of a genome segment (Default to 200)

Samples

Sample files for finding functional gene units in e. coli are available here:
genome.txt metabolism.sbml catalyze.txt queries.txt
Release History

Release History

1.1.1

This version

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1.1

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1.0

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Download Files

Download Files

TODO: Brief introduction on what you do with files - including link to relevant help section.

File Name & Checksum SHA256 Checksum Help Version File Type Upload Date
shogen2-1.1.1.tar.gz (6.9 kB) Copy SHA256 Checksum SHA256 Source Mar 6, 2014

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