Installation
You can install shogen2 by running:
$ pip install shogen2
Usage
Typical usage is:
$ shogen2.py [options] genomefile metabolismfile.sbml catalysationfile queries Options: -h, --help show this help message and exit -k K, --k=K Number of ranked shortest genome segments (Default to 5) -l L, --l=L maximum length of a genome segment (Default to 200)
Samples
- Sample files for finding functional gene units in e. coli are available here:
1 maintainer
Metadata
1 maintainer
Release files for shogen2 1.1.1
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| shogen2-1.1.1.tar.gz | 6.9 kB | Without provenance | Details for shogen2-1.1.1.tar.gz |
Release files / shogen2-1.1.1.tar.gz
| Download URL | shogen2-1.1.1.tar.gz |
|---|---|
| Size | 6.9 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
20f5d2d0e158f09c8be17b7ecb1a9ad392eb8e23cb6cf6ea344e0c3aad5a5e3b
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Security for shogen2 1.1.1
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