sicritfix 0.0.1

Python package to detect and correct oscillatory artifacts in mass spectrometry mzML data.

Oscillations_Corrector_Algorithm_SICRIT

SUPPRESSING SIGNAL ARTIFACTS IN CE-SICRIT-MS VIA OSCILLATION PROCESSING

This repository contains an algorithm designed to correct oscillations that appear in mass spectrometry (MS) spectra after applying the SICRIT ionization source.

The tool is implemented in Python and can be executed from the command-line interface (CLI) after installation.

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🚀 Key Features

• Automatic correction of oscillations in post-SICRIT MS data.
• Ready to be used as a command-line tool.
• Modular and extensible codebase.
• Easy to integrate into analytical data processing pipelines.

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📦 Installation

Optional: Using Conda environment

git clone https://github.com/YOUR_USERNAME/YOUR_REPO.git
cd SICRIT_Oscillations_corrector_algorithm
conda env create -f conda_env.yml
conda activate oscilations_env

### Execution- CLI usage
sicritfix --input path/to/input_file.mzML --output path/to/output_folder/
###For full CLI options: sicritfix --help