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SiFT - Biological signal filtering in single-cell data

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Signal FilTering is a tool for uncovering hidden biological processes in single-cell data. It can be applied to a wide range of tasks, from the removal of unwanted variation as a pre-processing step, through revealing hidden biological structure by utilizing prior knowledge with respect to existing signal, to uncovering trajectories of interest using reference data to remove unwanted variation.

SiFT pipeline

Visit our documentation for installation, tutorials, examples and more.

Manuscript

Please see our manuscript Zoe Piran and Mor Nitzan (2022).

Installation

Install SiFT via PyPI by running:

pip install sift-sc

Metadata

Release files for sift-sc 0.1.0

For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.

Source distribution (sdist)

Source distribution for sift-sc 0.1.0
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Built distribution (wheel)

Table of built distributions (wheels) for sift-sc 0.1.0
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sift_sc-0.1.0-py3-none-any.whl Python 3 none any Details

Total release size: 32.6 kB

Release files / sift_sc-0.1.0.tar.gz

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Release files / sift_sc-0.1.0-py3-none-any.whl

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0.1.0 This release

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