sigmond-scripts 1.0.0

Supporting functions for handling the c++ library sigmond

Sigmond Scripts

This repository contains a set of scripts used for the analysis of 2-point temporal correlation functions. They depend on the sigmond analysis package (https://bitbucket.org/ahanlon/sigmond), and you should first have sigmond installed before using these scripts.

These functions are modified for the PyCALQ package.

Directory structure

• analysis - contains the main scripts for running the analysis
  • run_sigmond.py - the driving script (pass -h to see options)
• data_conversion - contains various scripts for converting data to various formats (e.g. hdf5, LapH-binary, sigmond-bins).
• example_yamls - contains some example yaml files that can be passed to run_sigmond.py
• doc - contains documenation for how to use the analysis scripts (not up to date at all)

What software requirements are there?

• Python 3.8 is required
• Many Python modules
  • wheel
  • cython
  • pybind11
  • pyyaml
  • progressbar
  • sortedcontainers
  • pylatex
  • numpy
  • uncertainties
  • aenum
  • tqdm
  • h5py
  • matplotlib

How do I get started?

• You first need data in a format that sigmond can read (either LapH-binary or sigmond-bins). The data_conversion scripts can be used for this