Haplotype-window is a SMAP component that performs haplotyping between pairs of borders defined in a reference genome.
Project description
SMAP-Haplotype-Window
SMAP-Haplotype-Window is a plugin for SMAP that allows for the analysis of sequencing data from CRISPR edited loci.
Installation
Installation should be performed by installing SMAP, and afterwards install this plugin.
python3 -m venv .venv
source .venv/bin/activate
pip install -U pip
pip install ngs-smap
pip install smap-haplotype-window
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