Python tool to convert Snakemake metadata to wfcommons single JSON files
Project description
Install
$ pip install snakemake-wfcommons
Integrate into Snakemake
Call wfcommons-converter in the top-level all rule of your workflow to automatically convert the executed workflow into WfFormat like this:
rule all:
input:
<your finale result file>
shell:
"wfcommons-converter [<workflow-name.json>]"
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file snakemake_wfcommons-0.1.0.tar.gz.
File metadata
- Download URL: snakemake_wfcommons-0.1.0.tar.gz
- Upload date:
- Size: 4.0 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.12.9
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
e8d84989b6c75aad8131f73e873456bd9e8d36d812b62874c03940f9af89a5b4
|
|
| MD5 |
33fa9f045cfec48038e21fd7f68b1de6
|
|
| BLAKE2b-256 |
ab635c754dc640b8f2c3b1001d39a2c4b1cb4ad2725104af11354b55a5875402
|
File details
Details for the file snakemake_wfcommons-0.1.0-py3-none-any.whl.
File metadata
- Download URL: snakemake_wfcommons-0.1.0-py3-none-any.whl
- Upload date:
- Size: 4.5 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/6.1.0 CPython/3.12.9
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
f7c6acf8f4ae9fef84b576fa5140844a4666f3fd7743c9d29be2ef55bf49ca49
|
|
| MD5 |
13fba1c7caa39717ec2a5555e88fe3db
|
|
| BLAKE2b-256 |
04064c5b3e3497a5d6aa1ccd92a783fbe0c499fe0eb3b1c55e629424770acbe8
|
