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SnapBoost

PyPI version License: MIT scikit-learn

Heterogeneous Newton Boosting Machine (HNBM) — a gradient boosting framework that mixes decision trees and kernel ridge regressors instead of trees alone. The core HNBM framework is provided by the hnbm package; SnapBoost is a concrete implementation built on top of it.

Unlike XGBoost and LightGBM, which rely exclusively on decision trees as base learners, SnapBoost stochastically selects from a heterogeneous pool of learners at each boosting iteration. This lets the model capture both local, axis-aligned structure (trees) and smooth, global patterns (RBF kernel ridge).

This package is a Python/scikit-learn reimplementation inspired by SnapBoost: A Heterogeneous Boosting Machine (Parnell et al., NeurIPS 2020). See REFERENCES.md for papers, related work, and citation details.


Table of Contents


Features

Tag Description
gradient-boosting Second-order Newton boosting with gradient and Hessian weighting
heterogeneous-learners Mixes decision trees and kernel ridge regressors in one ensemble
classification Binary classification with logistic loss
regression Continuous targets with mean squared error loss
scikit-learn Implements the scikit-learn estimator API (fit, predict, score, …)
randomized-ensemble Stochastic base-learner selection per iteration

Installation

From PyPI (recommended):

pip install snapboost

From source:

git clone https://github.com/qiancapital/snapboost.git
cd snapboost
pip install .

Requirements: Python ≥ 3.8, NumPy, scikit-learn, tqdm, hnbm ≥ 0.1.1.


Quick Start

Classification

from sklearn.datasets import load_breast_cancer
from sklearn.model_selection import train_test_split
from snapboost import SnapBoostClassifier

X, y = load_breast_cancer(return_X_y=True)
X_train, X_test, y_train, y_test = train_test_split(X, y, random_state=42)

model = SnapBoostClassifier(
    num_iterations=100,
    learning_rate=0.1,
    random_state=42,
)
model.fit(X_train, y_train)

print("Accuracy:", model.score(X_test, y_test))
print("Probabilities shape:", model.predict_proba(X_test).shape)  # (n_samples, 2)
model.evaluate(X_test, y_test)  # prints log loss

Regression

from sklearn.datasets import load_diabetes
from sklearn.model_selection import train_test_split
from snapboost import SnapBoostRegressor

X, y = load_diabetes(return_X_y=True)
X_train, X_test, y_train, y_test = train_test_split(X, y, random_state=42)

model = SnapBoostRegressor(
    num_iterations=100,
    learning_rate=0.1,
    random_state=42,
)
model.fit(X_train, y_train)

print("R²:", model.score(X_test, y_test))
model.evaluate(X_test, y_test)  # prints RMSE

Examples & Results

Interactive Jupyter notebooks in static/ walk through classification, regression, and hyperparameter exploration. Each notebook trains SnapBoost and compares it against XGBoost and LightGBM on the same splits.

Notebook Dataset SnapBoost XGBoost LightGBM
Classification.ipynb Breast Cancer Wisconsin 97.2% accuracy 95.8% 96.5%
Regression.ipynb Diabetes R² 0.44, RMSE 55.7 R² 0.38, RMSE 58.4 R² 0.40, RMSE 57.7
Parameter_Exploration.ipynb Synthetic (piecewise + smooth) R² 0.986, RMSE 0.170 R² 0.986, RMSE 0.174 R² 0.987, RMSE 0.167

Run the notebooks locally:

pip install -r requirements.txt xgboost lightgbm
jupyter notebook static/

Classification

On the Breast Cancer dataset (250 boosting rounds), SnapBoost achieves the highest test accuracy and fewest misclassifications among the three boosters:

Test accuracy and error count vs XGBoost and LightGBM

Confusion matrix for SnapBoost on the held-out test set:

SnapBoost classification confusion matrix

Regression

On the Diabetes dataset (100 boosting rounds), SnapBoost improves R² and RMSE over tree-only baselines:

R², RMSE, and MAE comparison on Diabetes dataset

Predicted vs. actual disease progression on the test set:

Predicted vs actual scatter plot

SnapBoost fitted curve along BMI (other features held at training medians):

BMI vs target with SnapBoost fit

Residual distribution:

Regression residual histogram

Parameter exploration

On a synthetic dataset mixing piecewise-linear and sinusoidal structure, the notebook sweeps p_tree, tree depth ranges, and kernel ridge parameters. A mixed ensemble (p_tree=0.8) outperforms trees-only (p_tree=1.0, RMSE 0.174) and ridge-only (p_tree=0.0, RMSE 0.366):

Learned functions along one axis for different p_tree values

See Parameter_Exploration.ipynb for the full sweeps and baseline comparison tables.


API Reference

SnapBoostClassifier / SnapBoostRegressor

The recommended entry points (similar to XGBClassifier / XGBRegressor). A concrete HNBM that builds an ensemble from:

  • Decision trees with depths sampled uniformly from [min_max_depth, max_max_depth]
  • One RFF ridge regressor for smooth global fits

At each iteration, a learner is chosen with probability p_tree for trees (split evenly across depths) and 1 - p_tree for the ridge model.

from snapboost import SnapBoostClassifier, SnapBoostRegressor

clf = SnapBoostClassifier(
    num_iterations=100,
    learning_rate=0.1,
    p_tree=0.8,
    min_max_depth=4,
    max_max_depth=8,
    alpha=1.0,
    gamma=1.0,
    random_state=42,
    verbose=True,
)
clf.fit(X, y)

reg = SnapBoostRegressor(num_iterations=100, random_state=42)
reg.fit(X, y)

Methods

Method Classifier Regressor Description
fit(X, y) Train the ensemble
predict(X) Class labels (0/1) or continuous values
predict_proba(X) Class probabilities, shape (n_samples, 2)
decision_function(X) Raw logits
score(X, y) Accuracy or R²
evaluate(X, y) Prints and returns log loss or RMSE

SnapBoost

Legacy class that accepts a mode parameter ("classification" or "regression"). Prefer SnapBoostClassifier or SnapBoostRegressor for new code.

from snapboost import SnapBoost

model = SnapBoost(
    num_iterations=100,
    learning_rate=0.1,
    p_tree=0.8,
    min_max_depth=4,
    max_max_depth=8,
    alpha=1.0,
    gamma=1.0,
    mode="classification",  # or "regression"
    random_state=42,
    verbose=True,
)
model.fit(X, y)

HNBM

The abstract base class for building custom heterogeneous ensembles. Provided by the hnbm package — subclass or configure base_learners_ and probabilities_ before calling fit:

from sklearn.tree import DecisionTreeRegressor
from hnbm import HNBMClassifier, HNBMRegressor

class MyClassifier(HNBMClassifier):
    def __init__(self, **kwargs):
        super().__init__(**kwargs)
        self.base_learners_ = [DecisionTreeRegressor(max_depth=5)]
        self.probabilities_ = [1.0]

Parameters

Shared (HNBM / SnapBoostClassifier / SnapBoostRegressor)

Parameter Type Default Description
num_iterations int 100 Number of boosting rounds
learning_rate float 0.1 Shrinkage applied to each learner's contribution
random_state int or None None Seed for learner selection and tree fitting
verbose bool True Show a tqdm progress bar during training

The legacy SnapBoost class also accepts a mode parameter ("classification" or "regression").

SnapBoost-specific

Parameter Type Default Description
p_tree float 0.8 Probability of selecting a decision tree (vs. ridge)
min_max_depth int 4 Minimum max_depth for trees in the pool
max_max_depth int 8 Maximum max_depth for trees in the pool
alpha float 1.0 L2 regularization for the RFF ridge regressor
gamma float 1.0 RBF kernel coefficient for random Fourier features
n_components int 100 Number of random Fourier features

Label conventions (classification): accepts 0/1 or -1/+1. Predictions are returned as 0/1.


Docker

Build and run a container with SnapBoost pre-installed:

docker build -t snapboost .
docker run --rm snapboost

The default command verifies the import:

SnapBoost ready

Development

git clone https://github.com/qiancapital/snapboost.git
cd snapboost
pip install -r requirements.txt
pip install -e .
jupyter notebook static/   # optional: run example notebooks

Releases are published to PyPI via GitHub Actions when a GitHub release is created.


References & Citation

If you use this package or the HNBM framework in research, please cite the original SnapBoost paper:

Thomas Parnell, Andreea Anghel, Małgorzata Łazuka, Nikolas Ioannou, Sebastian Kurella, Peshal Agarwal, Nikolaos Papandreou, and Haralampos Pozidis. SnapBoost: A Heterogeneous Boosting Machine. Advances in Neural Information Processing Systems, 33, 2020.

@inproceedings{parnell2020snapboost,
  title     = {{SnapBoost}: A Heterogeneous Boosting Machine},
  author    = {Parnell, Thomas and Anghel, Andreea and {\L}azuka, Ma{\l}gorzata and Ioannou, Nikolas and Kurella, Sebastian and Agarwal, Peshal and Papandreou, Nikolaos and Pozidis, Haralampos},
  booktitle = {Advances in Neural Information Processing Systems},
  volume    = {33},
  pages     = {20872--20883},
  year      = {2020},
  eprint    = {2006.09745},
  doi       = {10.48550/arXiv.2006.09745}
}

Links: arXiv:2006.09745 · NeurIPS proceedings · IBM Research

For the full bibliography, related heterogeneous-boosting literature (KTBoost, DeepBoost, etc.), and notes on how this repo relates to the original IBM Snap ML implementation, see REFERENCES.md. Additional BibTeX entries are in CITATION.bib.


License

MIT — See LICENSE for full text.

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