spatialnde2 0.8.0

spatialnde2

SpatialNDE2 library

On Windows platform see WINDOWS_ANACONDA_BUILD.txt for the recommended build/install procedure

IMPORTANT: Backward incompatible changes in SpatialNDE2 version 0.8

Version 0.8 introduces a number of backward incompatible changes:

• Functions such as creating a recording or defining a channel or math function that are part of a recording database transaction now all require the active_transaction pointer as a parameter (usually the first argument; often replacing recdb)
• end_transaction() no longer returns a globalrevision object. Instead it returns a transaction object. You can call .globalrev_available() on the transaction object to wait for the globalrevision object to exist, or .globalrev() to wait for the globalrevision to be complete.
• The definition of snde_orientation3 and its embedded quaternion (and behavior of functions in quaternion.h) have changed
  • The quaternion is now first in the structure and the offset is now second (previously it was the other way around).
  • The first element of the quaternion is now the real part and it is followed by the three imaginary parts (previously the real part was last).
  • The final element of the offset is now 1.0 (previously it was 0.0).
• Python data access to ndarray refs is now by .data attribute rather than .data() method.
• Owner IDs no longer are provided when configuring a channel (channelconfig() constructor) so that parameter has been removed.
• Owner IDs are no longer required when creating a recording, so that parameter has been removed.
• Reserving a channel now returns a reserved_channel object rather than a channel object. This new reserved_channel object contains your rights to the channel and needs to be passed as the channel object was before into the construction of a recording.
• The instantiate() method of math_functions now has a new second-to-last parameter that is a set of computation tags for the math function. Pass {} in C++ or [] in python as an empty set of tags.

Prerequisites

INSTALLING ALL PREREQUISITES IS STRONGLY RECOMMENDED as not all possible combinations of missing prerequisites may have been tested

• cmake (v3.12 or above)
• libxml2
• eigen3 (v3.3 or above)
• OpenCL
• Python (v3.6 or above; including development libraries, and the following packages: numpy, setuptools, wheel)
• SWIG
• Cython
• libpng
• OpenThreads
• OpenSceneGraph
• GLUT (GLUT is safe to leave out)
• QT5 (including development libraries for at least Core, Widgets, Gui, OpenGL, and UiTools components)

Building

Create a build subdirectory. Use cmake, ccmake, or cmake-gui to configure from that build subdirectory, e.g.

   cmake ..

If using straight cmake, configuration options can be passed on the command line, e.g.

   cmake -DLIBXML2_INCLUDE_DIR=c:\libxml2\include ..

After you have figured out the necessary options for your system I recommend creating a shell script or batch file that automatically runs cmake with those options.

After cmake has run successfully, trigger the build from the build/ directory, e.g.

   make

Installing

The build process creates a "setup.py" script in your build directory that uses Python setuptools to install the built spatialnde2 binaries and SWIG wrapper into your Python installation's site_packages directory.

Run the build and install steps (BE SURE TO USE THE SAME COPY OF PYTHON YOU CONFIGURED WITH IN CMAKE):

   pip install --no-deps --no-build-isolation .

The latter command may need to be run as root or Administrator if your Python is installed centrally.

You can optionally run:

   make install

which will install binaries and headers into the APP_INSTALL_DIR (Windows) or a "spatialnde2" subdirectory under the CMAKE_INSTALL_PREFIX (Linux/Mac) configured in cmake. You can also set the cmake flag INSTALL_INTO_PYTHON_SITE_PACKAGES which will cause the "make install" step to automatically run the previously mentioned python installation step

Acknowledgments

This material is based in part upon work supported by the Air Force Research Laboratory under Contracts FA8649-21-P-0835, FA8650-19-F-5231, and FA8650-18-F-5203.

DISTRIBUTION STATEMENT A. Approved for public release: distribution unlimited.