A lightweight toolkit for manipulation of peptide spectrum matches in mass spectrometry-based proteomics
Installation
Create a Python enviroment and install specset using pip
Windows
On Windows, we have tested with the official Python distribution Python 3.12.9 at https://www.python.org/downloads/windows/. Open a command prompt from a working directory
python -m venv venv_specset
venv_specset\Scripts\activate.bat
pip install specset[full]
The full installation includes a GUI application.
Linux
On Linux, the installation is as follows.
python -m venv venv_specset
. venv_specset/bin/activate
pip install specset[full]
For the GUI application, one some Linux systems, the user has to install extra system libraries
sudo apt install libxcb-cursor0
or
sudo apt install libxcb-xinerama0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-xkb1 libxkbcommon-x11-0
Usage
Check the command line usage.
specset --help
The GUI application can be started by executing the command
specset-gui
1 maintainer
Metadata
1 maintainer
Release files for specset 0.9.3
For a detailed explanation of source distributions (sdists) and built distributions (wheels), please see the package formats documentation.
Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| specset-0.9.3.tar.gz | 300.4 kB | Without provenance | Details for specset-0.9.3.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| specset-0.9.3-py3-none-any.whl | Python 3 | none | any | Details for specset-0.9.3-py3-none-any.whl |
Total release size: 602.3 kB
Release files / specset-0.9.3.tar.gz
| Download URL | specset-0.9.3.tar.gz |
|---|---|
| Size | 300.4 kB |
| Tags | Source |
|
SHA-256 checksum How to use checksums |
1737e3127f6be3a2cc75eeb3b606d779f65c930fb64c38b97fd218dbec7fc070
|
|
BLAKE2b-256 checksum How to use checksums |
b5bfa686275b6e49f24fd61f7366a286cd3190aa14e22b0d5e2a83049e48201c
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.3
|
Release files / specset-0.9.3-py3-none-any.whl
| Download URL | specset-0.9.3-py3-none-any.whl |
|---|---|
| Size | 301.9 kB |
| Tags | Python 3 |
|
SHA-256 checksum How to use checksums |
0d66480139d45a93072ff7e93439978f0102d80f4f6a94760fd4a38c98be254c
|
|
BLAKE2b-256 checksum How to use checksums |
c8d18c9af655d91c9d8ee307c669b519c10db5ccc23b0b2ab58232fb55462526
|
| Upload date | |
|
Uploaded using Trusted Publishing? What is trusted publishing? |
No |
| Uploaded via |
twine/7.0.0 CPython/3.12.3
|
Security for specset 0.9.3
Provenance
Provenance describes where a file came from. On PyPI, provenance is shared via attestations, which provide a verifiable record of the build or publishing details. View details, limitations and caveats.
No provenance found
None of the files in this release were uploaded with provenance metadata.
A note on package security
PyPI is a repository for distributing packages, not a service for auditing them. While third-party security researchers and our staff do their best to detect and remove malicious packages, PyPI cannot guarantee the quality, security or suitability of any given package.
To learn more about protecting yourself from malicious actors, visit our package security documentation.
