Spatial Isoform Finder (Spl-IsoFind)
Spl-IsoFind can be used to detect spatially variable isoforms in long-read spatial transcriptomics data.
Installation
SplIsoFind requires Python 3.9 or higher. The easiest way to install is through the following command:
pip install SplIsoFind
Tutorials
The tutorial folder contains notebooks to run Spl-IsoFind on demo data. See the documentation for more information. The demo datasets can be downloaded here:
For citation and further information please refer to our preprint
1 maintainer
Metadata
1 maintainer
Release files for SplIsoFind 0.1.8
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Source distribution (sdist)
| File | Size | Uploaded | Provenance | Actions |
|---|---|---|---|---|
| splisofind-0.1.8.tar.gz | 21.3 kB | Without provenance | Details for splisofind-0.1.8.tar.gz |
Built distribution (wheel)
| File | Interpreter | ABI | Platform | Actions Reset |
|---|---|---|---|---|
| splisofind-0.1.8-py3-none-any.whl | Python 3 | none | any | Details for splisofind-0.1.8-py3-none-any.whl |
Total release size: 43.3 kB
Release files / splisofind-0.1.8.tar.gz
| Download URL | splisofind-0.1.8.tar.gz |
|---|---|
| Size | 21.3 kB |
| Tags | Source |
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SHA-256 checksum How to use checksums |
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Release files / splisofind-0.1.8-py3-none-any.whl
| Download URL | splisofind-0.1.8-py3-none-any.whl |
|---|---|
| Size | 22.0 kB |
| Tags | Python 3 |
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SHA-256 checksum How to use checksums |
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No |
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twine/6.2.0 CPython/3.9.23
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Security for SplIsoFind 0.1.8
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