Skip to main content

Compiled SPM package that can be called from Python

Project description

spm-runtime

Compiled Statistical Parametric Mapping (SPM) package that can be called from Python.

This package contains the compiled SPM runtime used by spm-python.

Installation

# Version built against the latest available MATLAB runtime
$ pip install spm-runtime
$ pip install spm-runtime==25.01
# Version built against a specific version of the MATLAB runtime
$ pip install spm-runtime-R2024b
$ pip install spm-runtime-R2024b==25.01

[!WARNING] The repository does not contain the compiled CTF file, but wheels released on pypi or as part of our GitHub releases do. It is not advised to install spm-runtime directly from the repository, as it assumes that the matlab compiler is available. Installation from our releases wheels and distributions is preferred.

Supported Python versions

Different versions of the MATLAB runtime are compatible with a different range of python versions. To use the runtime with a python version that is not supported by the latest MATLAB runtime, you can choose to install a package specifically compiled against another MATLAB runtime. The python versions supported by each MATLAB runtime is provided in the table below:

MATLAB Python
R2025b 3.10 - 3.13
R2025a 3.9 - 3.12
R2024b 3.9 - 3.12
R2024a 3.9 - 3.11
R2023b 3.9 - 3.11
R2023a 3.8 - 3.10
R2022b 3.8 - 3.10
R2022a 3.8 - 3.9
R2021b 3.7 - 3.9
R2021a 3.7 - 3.8
R2020b 3.6 - 3.8
R2020a 3.6 - 3.7

SPM standalone

On installation, spm-runtime exposes the SPM standalone, which can be executed in a terminal by calling spm.

$ spm --help

SPM - Statistical Parametric Mapping
https://www.fil.ion.ucl.ac.uk/spm/

Usage: spm [ fmri | eeg | pet ]
       spm COMMAND [arg...]
       spm [ -h | --help | -v | --version ]

Commands:
    batch          Run a batch job
    script         Execute a script
    function       Execute a function
    eval           Evaluate a MATLAB expression
    [NODE]         Run a specified batch node

Options:
    -h, --help     Print usage statement
    -v, --version  Print version information

Run 'spm [NODE] help' for more information on a command.

Python runtime

This package ships a compiled version of SPM that can be called from Python:

import spm_runtime

spm_runtime.endpoint("spm_standalone", nargout=0)

All MATLAB functions from the SPM package can be called. However, the inputs and outputs of these bindings are not very user-friendly. For pythonic bindings, use the spm-python package (which uses spm-runtime under the hood).

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

spm_runtime_r2023b-25.1.2.post2.tar.gz (81.7 MB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

spm_runtime_r2023b-25.1.2.post2-py3-none-any.whl (81.7 MB view details)

Uploaded Python 3

File details

Details for the file spm_runtime_r2023b-25.1.2.post2.tar.gz.

File metadata

File hashes

Hashes for spm_runtime_r2023b-25.1.2.post2.tar.gz
Algorithm Hash digest
SHA256 b636e3218b9ccf216770597e17f4f61973a4734785dc9c4f912b659ddf0aaceb
MD5 49e7615af7b7c43f107501dbf3e096b9
BLAKE2b-256 b93a6c37389d094af44e9fa7672906f6950806bf9c2c6c04bb1f9bb32b586e06

See more details on using hashes here.

Provenance

The following attestation bundles were made for spm_runtime_r2023b-25.1.2.post2.tar.gz:

Publisher: release-r2023b.yml on spm/spm-runtime

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

File details

Details for the file spm_runtime_r2023b-25.1.2.post2-py3-none-any.whl.

File metadata

File hashes

Hashes for spm_runtime_r2023b-25.1.2.post2-py3-none-any.whl
Algorithm Hash digest
SHA256 68c852da4fdaac0a1fe317b4572bca21a5dcd9549266eaacc2abbc3f9e78c855
MD5 1e78756d719e30b00c77d88877e96a65
BLAKE2b-256 8a1a286183735c088203de7de765e4ee547a6e24dee21a4add053b1df828aa1c

See more details on using hashes here.

Provenance

The following attestation bundles were made for spm_runtime_r2023b-25.1.2.post2-py3-none-any.whl:

Publisher: release-r2023b.yml on spm/spm-runtime

Attestations: Values shown here reflect the state when the release was signed and may no longer be current.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page