Helper library for working with Stan models in Python
Project description
.. image:: https://travis-ci.org/hammerlab/stanity.svg
:target: https://travis-ci.org/hammerlab/stanity
:alt: build status
.. image:: https://coveralls.io/repos/github/hammerlab/stanity/badge.svg?branch=master
:target: https://coveralls.io/github/hammerlab/stanity
:alt: coverage
.. image:: https://badge.fury.io/py/stanity.svg
:target: https://badge.fury.io/py/stanity
stanity
=========
python convenience functions for working with Stan models (via pystan)
Functionality:
stanity.fit
thin wrapper around ``pystan.stan`` that caches compiled models
stanity.psisloo
thin wrapper around ``psisloo`` (implemented in https://github.com/avehtari/PSIS/blob/master/py/psis.py)
stanity.loo_compare
compare model fit using PSIS-LOO, similar to methods implemented in the R package loo
Installation
-------------
Install from pip:
::
pip install stanity
::
Or, from a git checkout, run:
::
pip install .
To run the tests:
::
nosetests
:target: https://travis-ci.org/hammerlab/stanity
:alt: build status
.. image:: https://coveralls.io/repos/github/hammerlab/stanity/badge.svg?branch=master
:target: https://coveralls.io/github/hammerlab/stanity
:alt: coverage
.. image:: https://badge.fury.io/py/stanity.svg
:target: https://badge.fury.io/py/stanity
stanity
=========
python convenience functions for working with Stan models (via pystan)
Functionality:
stanity.fit
thin wrapper around ``pystan.stan`` that caches compiled models
stanity.psisloo
thin wrapper around ``psisloo`` (implemented in https://github.com/avehtari/PSIS/blob/master/py/psis.py)
stanity.loo_compare
compare model fit using PSIS-LOO, similar to methods implemented in the R package loo
Installation
-------------
Install from pip:
::
pip install stanity
::
Or, from a git checkout, run:
::
pip install .
To run the tests:
::
nosetests
Project details
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
stanity-0.1.4.tar.gz
(25.9 kB
view details)
File details
Details for the file stanity-0.1.4.tar.gz
.
File metadata
- Download URL: stanity-0.1.4.tar.gz
- Upload date:
- Size: 25.9 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
File hashes
Algorithm | Hash digest | |
---|---|---|
SHA256 |
3b62327518e85587ddbae605c1f5fe6280caf6337ae84fe16958ab9265719028
|
|
MD5 |
dcbc46ee39bdc121c1102b1944b17d70
|
|
BLAKE2b-256 |
5d8469fa2281acbbb4e44fbbdc9e0198803121dda9f3c1da5f054ead8000a809
|